Colwellia chukchiensis CGMCC 1.9127 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Colwellia chukchiensis CGMCC 1.9127 RM systems
Ref: Chen,X. unpublished
REBASE ref # 26142
Contig set: 4,035,170 bp
GenBank #: NBOC00000000 (NZ_NBOC00000000)
REBASE acronym: Cch9127
Org_num: 28312
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 145 | ATPase AAA | |||
| 146 | R | SpuJNE7ORF15505P (100% identity) | Cch9127ORFFP | |
| 147 | BstXI family restriction endonuclease | |||
| 148 | S | S.VchSXTORFAP (100% identity) | S.Cch9127ORFFP | |
| 149 | M | M.VchSXTORFAP (100% identity) | M.Cch9127ORFFP | |
| 151 | WYL domain-containing protein | |||
| 284 | M48 family peptidase | |||
| 287 | R | VcaBoB90ORF6865P (98% identity) | Cch9127ORFDP | |
| 289 | S | S.Ama615ORF21255P (56% identity) | S.Cch9127ORFDP | |
| 290 | DNA damage-inducible protein D | |||
| 291 | 60 aa hypothetical protein | |||
| 293 | M | M.Aha174ORF3425P (98% identity) | M.Cch9127ORFDP | |
| 294 | 76 aa hypothetical protein | |||
| 397 | 130 aa hypothetical protein BM527_04470 | |||
| 398 | M | M.PrhCg6ORFDP (94% identity) | M.Cch9127ORFBP | |
| 399 | S | S.GagORF3862P (48% identity) | S.Cch9127ORFBP | |
| 400 | 1198 aa hypothetical protein | |||
| 401 | 169 aa hypothetical protein | |||
| 402 | R | Psp20439ORF1397P (96% identity) | Cch9127ORFBP | |
| 403 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16 | PDZ domain-containing protein | |||
| 17 | S | CgiH1496ORF2230P (10% identity) | S.Cch9127ORFHP | |
| 18 | RM | Psa27ORF10730P (37% identity) | Cch9127ORFHP | |
| 19 | 731 aa hypothetical protein | |||
| 146 | type I site-specific deoxyribonuclease, HsdR family | |||
| 147 | R | Vch2387ORFEP (100% identity) | Cch9127ORFGP | |
| 148 | type I restriction endonuclease subunit S | |||
| 144 | BREX system P-loop protein BrxC | |||
| 145 | RM | Ptr520ORF2156P (57% identity) | Cch9127ORFAP | |
| 146 | DUF262 domain-containing protein | |||
| 262 | MarR family transcriptional regulator | |||
| 264 | M | M.VchAMOZORF11P (90% identity) | M.Cch9127ORFEP | |
| 265 | DUF3578 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 142 | 60 aa hypothetical protein | |||
| 143 | R | Vch216MrrP (100% identity) | Cch9127MrrP | |
| 144 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | |||
| 143 | restriction system protein | |||
| 144 | R | VchSXTMcrCP (100% identity) | Cch9127McrCP | |
| 145 | R | SpuJNE7McrBP (100% identity) | Cch9127McrBP | |
| 146 | type I site-specific deoxyribonuclease, HsdR family | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 199 | DUF2970 domain-containing protein | |||
| 200 | M | M.Csp7DORF905P (90% identity) | M.Cch9127ORFCP | |
| 201 | 448 aa hypothetical protein AXW17_05960 | |||