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Putative Vibrio parahaemolyticus M1-1 RM systems
Ref: Kumar,R. et al. unpublished
REBASE ref # 26014
Contig set: 5,507,741 bp
GenBank #: PDDQ00000000 (NZ_PDDQ00000000)
REBASE acronym: VpaM11
Org_num: 28275
All begin CNR26_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5200 | sigma-54-dependent Fis family transcriptional | |||
5205 | R | VpaTW01ORF21795P (99% identity) | VpaM11ORF5210P | |
??? | M | M.VpaTW01ORF21795P (100% identity) | M.VpaM11ORF5210P | |
5215 | S | S.VpaTW01ORF21795P (100% identity) | S.VpaM11ORF5210P | |
5220 | 511 aa hypothetical protein | |||
18175 | 0 aa hypothetical protein | |||
18180 | R | Spu10736IIP (95% identity) | VpaM11ORF18180P | |
18185 | 160 aa hypothetical protein | |||
9300 | 625 aa hypothetical protein | |||
??? | S | S.VpaTW01ORF3235P (100% identity) | S.VpaM11ORF9310P | |
9310 | M | M.VpaTW01ORF3235P (100% identity) | M.VpaM11ORF9310P | |
9315 | 132 aa hypothetical protein | |||
9320 | 36 aa hypothetical protein | |||
9325 | 49 aa hypothetical protein | |||
9330 | elongation factor Ts | |||
9335 | 68 aa hypothetical protein | |||
9340 | 94 aa hypothetical protein | |||
??? | N6-methyltransferase | |||
9345 | site-specific DNA-methyltransferase | |||
??? | R | VpaS2ORFBP (100% identity) | VpaM11ORF9310P | |
9355 | 806 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
16845 | ribulose-phosphate 3-epimerase | |||
16850 | M | M.VphVPD14DamP (100% identity) | GATC | M.VpaM11DamP |
16855 | cell division protein DamX | |||
9340 | 94 aa hypothetical protein | |||
??? | M | M.VpaS2ORFCP (100% identity) | M.VpaM11ORF9345P | |
9350 | DEAD/DEAH box helicase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
20135 | 363 aa hypothetical protein | |||
20140 | M | M.VpeOK1ORFIP (91% identity) | M.VpaM11ORF20140P | |
20145 | R | VpaHA2ORF24335P (98% identity) | VpaM11ORF20140P | |
20150 | 141 aa hypothetical protein | |||
3895 | 1293 aa hypothetical protein | |||
3900 | R | VpaTW01ORF12755P (100% identity) | VpaM11ORF3905P | |
3905 | M | M.VpaTW01ORF12755P (100% identity) | M.VpaM11ORF3905P | |
3910 | WYL domain-containing protein |