Streptomyces species JV178 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptomyces species JV178 RM systems
Ref: Qi,Y. et al. unpublished
REBASE ref # 25923
Contig set: 10,649,910 bp
GenBank #: PEKU00000000 (NZ_PEKU00000000)
REBASE acronym: Ssp178
Org_num: 28207
All begin CTU88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3815 | esterase | |||
| 3820 | M | M.SspRPA42ORF27200P (61% identity) | M.Ssp178ORF3820P | |
| 3825 | 168 aa hypothetical protein | |||
| 21445 | 83 aa hypothetical protein | |||
| 21450 | R | Kbu45791ORF29590P (66% identity) | Ssp178ORF21460P | |
| 21455 | S | S.Sex7ORF20670P (42% identity) | S.Ssp178ORF21460P | |
| 21460 | M | M.Svi6ORF25440P (74% identity) | M.Ssp178ORF21460P | |
| 21465 | 714 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 38050 | 290 aa hypothetical protein | |||
| 38055 | M | M.Ssp1622ORF47640P (85% identity) | M.Ssp178ORF38055P | |
| 38060 | replicative DNA helicase | |||
| 1890 | 127 aa hypothetical protein | |||
| 1895 | M | M.Seu1ORF29845P (87% identity) | M.Ssp178ORF1895P | |
| 1900 | 205 aa hypothetical protein | |||
| 14110 | DUF4913 domain-containing protein | |||
| ??? | M | M.Sli1326ORFEP (67% identity) | M.Ssp178ORF14115P | |
| 14120 | 372 aa hypothetical protein | |||
| 14355 | 209 aa hypothetical protein | |||
| 14360 | M | M.Seu80ORF8325P (92% identity) | M.Ssp178ORF14360P | |
| 14365 | replicative DNA helicase | |||
| 3495 | protein kinase | |||
| 3500 | M | M.Ssp411ORF11380P (64% identity) | M.Ssp178ORF3500P | |
| 3505 | serine/threonine protein kinase | |||
| 3515 | helicase | |||
| 3520 | RM | Ssp285ORF33710P (74% identity) | Ssp178ORF3520P | |
| 3525 | 788 aa hypothetical protein | |||
| 3630 | 316 aa hypothetical protein | |||
| 3635 | M | M.Ssp280ORF13570P (98% identity) | M.Ssp178ORF3635P | |
| 3640 | 381 aa hypothetical protein | |||
| 4115 | 189 aa hypothetical protein | |||
| 4120 | RM | Shy1717ORF2334P (97% identity) | Ssp178ORF4120P | |
| 4125 | chromosome segregation protein SMC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 42355 | muramidase | |||
| 42360 | R | Sgr8890McrCP (69% identity) | Ssp178McrCP | |
| ??? | R | Sga15439McrBP (64% identity) | Ssp178McrBP | |
| 42375 | phage tail protein | |||
| 21420 | aldehyde dehydrogenase | |||
| 21425 | R | Sca00349ORF21090P (50% identity) | Ssp178ORF21425P | |
| 21430 | AAA family ATPase | |||
| 21425 | 237 aa hypothetical protein | |||
| 21430 | R | SspRPA45ORF22700P (80% identity) | Ssp178ORF21430P | |
| 21435 | DUF397 domain-containing protein | |||
| 8320 | preprotein translocase subunit SecA | |||
| 8325 | R | SspUA24ORF30090P (80% identity) | Ssp178ORF8325P | |
| 8330 | helicase | |||
| 8325 | HNH endonuclease | |||
| 8330 | R | SspHM190ORFDP (85% identity) | Ssp178ORF8330P | |
| 8335 | ATP-binding protein | |||