Salmonella enterica subsp. enterica serovar Dublin CFSAN059898 |
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Putative Salmonella enterica subsp. enterica serovar Dublin CFSAN059898 RM systems
Ref: Fashae,K. unpublished
REBASE ref # 25835
| Sequence length: | GenBank #: | |
| Chromosome: | 4,876,578 bp | NPLS00000000 (NZ_NPLS00000000) |
| Chromosome: | 4,843,563 bp | CP075113 |
REBASE acronym: Sen59898
Org_num: 28143
All begin CCO47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11300 | DUF91 domain-containing protein | |||
| 11305 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen59898ORF11315P |
| 11310 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen59898ORF11315P |
| 11315 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen59898ORF11315P |
| 11320 | restriction endonuclease | |||
| Chromosome | ||||
| 20315 | restriction endonuclease | |||
| 20320 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen59898ORF11315P |
| 20325 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen59898ORF11315P |
| 20330 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen59898ORF11315P |
| 20335 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24325 | Fis family transcriptional regulator | |||
| 24330 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen59898ORF24330P |
| 24335 | DUF2556 domain-containing protein | |||
| 270 | 249 aa hypothetical protein | |||
| 275 | M | M.Ssp3CORF22905P (100% identity) | M.Sen59898ORF275P | |
| 280 | 245 aa hypothetical protein | |||
| 360 | PerC family transcriptional regulator | |||
| 365 | M | M.Ssp3CORF22825P (100% identity) | M.Sen59898ORF365P | |
| 370 | RusA family crossover junction | |||
| 22070 | replication endonuclease | |||
| 22075 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen59898ORF22075P |
| 22080 | 75 aa hypothetical protein | |||
| 18345 | drug/metabolite exporter YedA | |||
| 18350 | V | V.StyUK1DcmP (100% identity) | V.Sen59898DcmP | |
| 18355 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen59898DcmP |
| 18360 | phosphohydrolase | |||
| 5770 | 174 aa hypothetical protein | |||
| 5775 | M | M.Ssp3CORF17125P (100% identity) | M.Sen59898ORF5775P | |
| 5780 | DUF550 domain-containing protein | |||
| 13685 | cell division protein DamX | |||
| 13690 | M | M.StyTDamP (100% identity) | GATC | M.Sen59898DamP |
| 13695 | ribulose-phosphate 3-epimerase | |||
| Chromosome | ||||
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.Sen59898DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen59898ORF24330P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 5450 | TraR/DksA family transcriptional regulator | |||
| 5455 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen59898ORF22075P |
| 5460 | replication endonuclease | |||
| 9040 | 249 aa hypothetical protein | |||
| 9045 | M | M.Ssp3CORF22905P (100% identity) | M.Sen59898ORF275P | |
| 9050 | ead/Ea22-like family protein | |||
| 9115 | PerC family transcriptional regulator | |||
| ??? | M | M.Sen2469ORF9230P (100% identity) | M.Sen59898ORF9120P | |
| 9125 | RusA family crossover junction | |||
| 13995 | drug/metabolite exporter YedA | |||
| 14000 | V | V.StyUK1DcmP (100% identity) | V.Sen59898DcmP | |
| 14005 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen59898DcmP |
| 14010 | phosphohydrolase | |||
| 14785 | DUF550 domain-containing protein | |||
| 14790 | M | M.Ssp3CORF17125P (100% identity) | M.Sen59898ORF5775P | |
| 14795 | ead/Ea22-like family protein | |||
| 20445 | YebC/PmpR family DNA-binding transcriptional | |||
| 20450 | R | SspSAL045ORF19515P (100% identity) | Sen59898ORF20450P | |
| 20455 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7310 | MFS transporter | |||
| 7315 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen59898ORF7315P |
| 7320 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen59898ORF7315P |
| 7325 | 33 aa hypothetical protein | |||
| Chromosome | ||||
| 18110 | 33 aa hypothetical protein | |||
| 18115 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen59898ORF7315P |
| 18120 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen59898ORF7315P |
| 18125 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11315 | DNA methyltransferase | |||
| ??? | R | SenDCMrrP (100% identity) | Sen59898MrrP | |
| 11325 | type I restriction endonuclease subunit M | |||
| 11315 | DNA methyltransferase | |||
| 11320 | R | Ssp3CMrrP (100% identity) | Sen59898Mrr2P | |
| 11325 | type I restriction endonuclease subunit M | |||
| Chromosome | ||||
| 20310 | N-6 DNA methylase | |||
| 20315 | R | Ssp3CMrrP (100% identity) | Sen59898Mrr2P | |
| 20320 | type I restriction-modification system subunit | |||