Prevotella intermedia WW2834 |
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Putative Prevotella intermedia WW2834 RM systems
Ref: Haigh,R.D. et al. unpublished
REBASE ref # 25831
Contig set: 2,804,910 bp
GenBank #: NSLY00000000 (NZ_NSLY00000000)
REBASE acronym: Pin2834
Org_num: 28107
All begin CLI71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11175 | site-specific integrase | |||
| 11180 | S | S4.Bfr4096BORF14130P (71% identity) | S1.Pin2834ORF11205P | |
| 11185 | S | S2.Pin2069IP (92% identity) | S2.Pin2834ORF11205P | |
| 11190 | S | S.Pin2069II (54% identity) | S3.Pin2834ORF11205P | |
| 11195 | S | S2.Pme3C08ORF2021P (68% identity) | S4.Pin2834ORF11205P | |
| 11200 | cell filamentation protein Fic | |||
| 11205 | M | M.Pti22865ORFDP (99% identity) | M.Pin2834ORF11205P | |
| 11210 | 0 aa hypothetical protein | |||
| 11215 | R | PmeOORF7324P (98% identity) | Pin2834ORF11205P | |
| 11220 | C | C.PinWW855ORF6635P (98% identity) | C.Pin2834ORF11205P | |
| 11225 | IS982 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8730 | 64 aa hypothetical protein | |||
| 8735 | M | M.Pin2033I (98% identity) | GATC | M.Pin2834ORF8735P |
| 8740 | R | PinWW855ORF1100P (99% identity) | GATC | Pin2834ORF8735P |
| 8745 | 293 aa hypothetical protein | |||
| 1545 | prolipoprotein diacylglyceryl transferase | |||
| 1550 | M | M.PinZORFFP (98% identity) | M.Pin2834ORF1550P | |
| 1555 | R | PinWW414ORF9365P (99% identity) | Pin2834ORF1550P | |
| 1560 | 65 aa hypothetical protein | |||
| 6705 | 76 aa hypothetical protein | |||
| 6710 | C | C.Pin2837IIP (100% identity) | C.Pin2834ORF6715P | |
| 6715 | M | M1.Pin2837II (100% identity) | M1.Pin2834ORF6715P | |
| 6720 | M | M2.Pin2837II (100% identity) | M2.Pin2834ORF6715P | |
| 6725 | R | Pin2837IIP (100% identity) | Pin2834ORF6715P | |
| 6730 | transcriptional regulator | |||
| 1375 | 199 aa hypothetical protein | |||
| 1380 | R | Pin1653ORF10970P (99% identity) | Pin2834ORF1385P | |
| 1385 | M | M.Pin1653ORF10970P (99% identity) | M.Pin2834ORF1385P | |
| 1390 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11860 | aspartate 1-decarboxylase | |||
| 11865 | R | Pni103McrBP (94% identity) | Pin2834McrBP | |
| 11870 | R | Pin2837McrCP (97% identity) | Pin2834McrCP | |
| 11875 | IS30 family transposase | |||