Prevotella intermedia WW855 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Prevotella intermedia WW855 RM systems
Ref: Haigh,R.D. et al. unpublished
REBASE ref # 25831
Contig set: 2,688,123 bp
GenBank #: NSLZ00000000 (NZ_NSLZ00000000)
REBASE acronym: PinWW855
Org_num: 28106
All begin CLI70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11230 | 0 aa hypothetical protein | |||
| 11235 | M | M.CspF0512II (95% identity) | M.PinWW855ORF11235P | |
| 11240 | S | S.Pgu3439ORF7345P (54% identity) | S.PinWW855ORF11235P | |
| 11245 | addiction module protein | |||
| 11250 | R | CspF0512IIP (91% identity) | PinWW855ORF11235P | |
| 11255 | 244 aa hypothetical protein | |||
| 6605 | site-specific integrase | |||
| 6610 | S | S3.PinWW414ORF5835P (45% identity) | S1.PinWW855ORF6635P | |
| 6615 | S | S4.PinWW414ORF5835P (51% identity) | S2.PinWW855ORF6635P | |
| 6620 | S | S1.PinWW414ORF5835P (43% identity) | S3.PinWW855ORF6635P | |
| 6625 | S | S1.Bxy566ORF13435P (55% identity) | S4.PinWW855ORF6635P | |
| 6630 | cell filamentation protein Fic | |||
| 6635 | M | M.Pin2834ORF11205P (97% identity) | M.PinWW855ORF6635P | |
| 6640 | 218 aa hypothetical protein | |||
| 6645 | R | PmeOORF7324P (98% identity) | PinWW855ORF6635P | |
| 6650 | C | C.Pin2834ORF11205P (98% identity) | C.PinWW855ORF6635P | |
| 6655 | DNA methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5195 | IS982 family transposase | |||
| 5200 | RM | Pin1949ORF12085P (60% identity) | PinWW855ORF5200P | |
| 5205 | ATP-dependent helicase | |||
| 5315 | 186 aa hypothetical protein | |||
| 5320 | M | M.Bpy11853ORF994P (95% identity) | M.PinWW855ORF5320P | |
| 5325 | ATP-binding protein | |||
| 1095 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |||
| 1100 | M | M.Pin1101ORFAP (98% identity) | GATC | M.PinWW855ORF1100P |
| 1105 | R | Pin2834ORF8735P (99% identity) | GATC | PinWW855ORF1100P |
| 1110 | 293 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5465 | 650 aa hypothetical protein | |||
| 5470 | R | Pje333ORF11925P (84% identity) | PinWW855ORF5475P | |
| ??? | M | M.Psc2052ORF9970P (65% identity) | M.PinWW855ORF5475P | |
| 5485 | 205 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10040 | aspartate 1-decarboxylase | |||
| ??? | R | Pin2838McrBP (87% identity) | PinWW855McrBP | |
| 10050 | R | Pin2698McrCP (96% identity) | PinWW855McrCP | |
| 10055 | polyketide cyclase | |||