Escherichia coli RM7788 |
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Putative Escherichia coli RM7788 RM systems
Ref: Lee,B. et al. unpublished
REBASE ref # 25799
Contig set: 5,027,014 bp
GenBank #: NWVS00000000 (NZ_NWVS00000000)
REBASE acronym: Eco7788
Org_num: 27968
All begin CO986_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9745 | metal-dependent hydrolase | |||
| 9750 | M | M.Ecostr10ORF18570P (100% identity) | M.Eco7788ORF9750P | |
| 9755 | S | S.Ecostr10ORF18570P (100% identity) | S.Eco7788ORF9750P | |
| 9760 | 61 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26015 | M | M.EcoYB141ORF13470P (59% identity) | M.Eco7788ORF26015P | |
| 25100 | LexA family transcriptional regulator | |||
| 25105 | M | M.Ecostr10ORF1530P (100% identity) | GATC | M.Eco7788ORF25105P |
| 25110 | 65 aa hypothetical protein | |||
| 9700 | DNA repair protein | |||
| 9705 | RM | Ecostr10ORF18620P (100% identity) | Eco7788ORF9705P | |
| 9710 | TIGR02687 family protein | |||
| 24405 | phage portal protein | |||
| 24410 | R | Sen24760ORF10430P (100% identity) | Eco7788ORF24415P | |
| 24415 | M | M.Sen24760ORF10430P (100% identity) | M.Eco7788ORF24415P | |
| 24420 | DinI family protein | |||
| 4995 | phage portal protein | |||
| 5000 | M | M.EcoST130ORF15675P (100% identity) | M.Eco7788ORF5000P | |
| 5005 | C | C.Sen24590ORF20925P (74% identity) | C.Eco7788ORF5000P | |
| 5010 | R | Ecostr10ORF20P (100% identity) | GRGCYC | Eco7788ORF5000P |
| 5015 | replication endonuclease | |||
| 23585 | 101 aa hypothetical protein | |||
| 23590 | M | M.Sso128ORF27515P (100% identity) | SAY | M.Eco7788ORF23590P |
| 23595 | 73 aa hypothetical protein | |||
| 24430 | replication endonuclease | |||
| 24435 | M | M.Eco7807ORF24595P (100% identity) | GATC | M.Eco7788ORF24435P |
| 24440 | 75 aa hypothetical protein | |||
| 12815 | ribulose-phosphate 3-epimerase | |||
| 12820 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco7788DamP |
| 12825 | cell division protein DamX | |||
| 10690 | phosphohydrolase | |||
| 10695 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco7788DcmP |
| 10700 | V | V.SflFF64DcmP (100% identity) | V.Eco7788DcmP | |
| 10705 | EamA family transporter | |||
| 530 | TrmB family transcriptional regulator | |||
| 535 | M | M.Eco7807ORF540P (100% identity) | M.Eco7788ORF535P | |
| 555 | Shiga toxin Stx2 subunit A | |||
| 19305 | Fis family transcriptional regulator | |||
| 19310 | M | M.Eco7807ORF19550P (100% identity) | ATGCAT | M.Eco7788ORF19310P |
| 19315 | transporter | |||
| 1485 | TrmB family transcriptional regulator | |||
| 1490 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco7788ORF1490P | |
| 1510 | Shiga toxin Stx2 subunit A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18775 | isocitrate dehydrogenase | |||
| 18780 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco7788ORF18780P |
| 18785 | DNA-invertase | |||