Pseudomonas fluorescens ITEM 17298 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas fluorescens ITEM 17298 RM systems
Ref: Fanelli,F. unpublished
REBASE ref # 25784
Contig set: 6,288,162 bp
GenBank #: NPKB00000000 (NZ_NPKB00000000)
REBASE acronym: Pfl17298
Org_num: 27957
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 207 | 62 aa hypothetical protein | |||
| 208 | R | PveR4ORFHP (88% identity) | Pfl17298ORFGP | |
| 214 | 94 aa hypothetical protein | |||
| 215 | 224 aa hypothetical protein | |||
| 216 | 73 aa hypothetical protein | |||
| 217 | S | S.RfeDORF4006P (43% identity) | S.Pfl17298ORFGP | |
| 218 | M | M.PveR4ORFHP (90% identity) | M.Pfl17298ORFGP | |
| 223 | C | C.PspS49ORF890P (80% identity) | C.Pfl17298ORFGP | |
| 224 | 217 aa hypothetical protein | |||
| 813 | restriction endonuclease | |||
| 816 | S | S.Pfl3636ORF11905P (57% identity) | S.Pfl17298ORFFP | |
| 820 | M | M.PspBACORF5110P (100% identity) | M.Pfl17298ORFFP | |
| 822 | 122 aa hypothetical protein | |||
| 823 | transcriptional regulator | |||
| 824 | 181 aa hypothetical protein | |||
| 825 | 229 aa hypothetical protein | |||
| 826 | R | PspBACORF5110P (87% identity) | Pfl17298ORFFP | |
| 830 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9 | 82 aa hypothetical protein | |||
| 11 | M | M.Psp26793ORFCP (97% identity) | M.Pfl17298ORFAP | |
| 16 | phage portal protein | |||
| 39 | 77 aa hypothetical protein | |||
| 41 | RM | PmeTTORFAP (85% identity) | Pfl17298ORFIP | |
| 48 | 85 aa hypothetical protein | |||
| 33 | DUF3800 domain-containing protein | |||
| 34 | R | PflPfar1ORFDP (85% identity) | Pfl17298ORFDP | |
| 131 | DUF2528 domain-containing protein | |||
| 135 | M | M.Pbr108ORF3435P (98% identity) | M.Pfl17298ORFEP | |
| 139 | 67 aa hypothetical protein | |||
| 378 | 74 aa hypothetical protein | |||
| 379 | M | M.PveR4ORFFP (78% identity) | M.Pfl17298ORFBP | |
| 382 | HD domain-containing protein | |||
| 403 | 116 aa hypothetical protein | |||
| 406 | M | M.Psp2335ORF6070P (93% identity) | M.Pfl17298ORFCP | |
| 407 | 132 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 541 | 146 aa hypothetical protein | |||
| 542 | R | PflAnt01MrrP (98% identity) | Pfl17298MrrP | |
| 543 | 176 aa hypothetical protein, partial | |||
| 811 | HNH endonuclease | |||
| 813 | R | PspBACMrrP (100% identity) | Pfl17298Mrr2P | |
| 816 | 455 aa hypothetical protein | |||