Vibrio cholerae VcN1 |
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Putative Vibrio cholerae VcN1 RM systems
Ref: Hossain,M. et al. unpublished
REBASE ref # 26916
Contig set: 4,145,933 bp
GenBank #: PDNJ00000000 (NZ_PDNJ00000000)
REBASE acronym: VchN1
Org_num: 27878
All begin CR151_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16840 | 629 aa hypothetical protein | |||
| 16845 | S | S.Pma1ORF36110P (62% identity) | S.VchN1ORF16850P | |
| 16850 | M | M.SspANAORF2027P (97% identity) | M.VchN1ORF16850P | |
| 16855 | R | SspANAORF2027P (84% identity) | VchN1ORF16850P | |
| 16860 | 0 aa hypothetical protein | |||
| 17145 | integrase | |||
| 17150 | R | Spu10736IIP (99% identity) | VchN1ORF17170P | |
| 17155 | HrgA protein | |||
| 17160 | S | S.VsiYA2ORF10075P (51% identity) | S.VchN1ORF17170P | |
| 17165 | 349 aa hypothetical protein | |||
| 17170 | M | M.Vsp1105ORF18395P (96% identity) | M.VchN1ORF17170P | |
| 17175 | integrase | |||
| 9160 | addiction module antitoxin | |||
| 9165 | M | M.Vch77ORF2702P (98% identity) | M.VchN1ORF9165P | |
| 9170 | S | S.Vch055ORF2675P (64% identity) | S.VchN1ORF9165P | |
| 9175 | R | VchFL14ORF19345P (98% identity) | VchN1ORF9165P | |
| 9180 | 185 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10685 | XRE family transcriptional regulator | |||
| 10690 | M | M.Val64140ORF3435P (99% identity) | M.VchN1ORF10690P | |
| 10695 | 431 aa hypothetical protein | |||
| 10700 | 220 aa hypothetical protein | |||
| 10705 | S | S.Val64140ORF10085P (94% identity) | S.VchN1ORF10690P | |
| 10710 | protein kinase | |||
| 4980 | cell division protein DamX | |||
| 4985 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchN1DamP |
| 4990 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13695 | 45 aa hypothetical protein | |||
| 13700 | R | Vch62ORF2409P (100% identity) | VchN1ORF13700P | |
| 13705 | 75 aa hypothetical protein | |||