Planktothrix agardhii NIES-204 |
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Putative Planktothrix agardhii NIES-204 RM systems
Ref: Shimura,Y. et al. unpublished
REBASE ref # 26410
| Sequence length: | GenBank #: | |
| Chromosome: | 4,780,238 bp | AP017991 |
| plasmid plasmid1: | 117,686 bp | AP017992 |
| plasmid plasmid2: | 99,115 bp | AP017993 |
| plasmid plasmid3: | 52,365 bp | AP017994 |
| plasmid plasmid4: | 34,730 bp | AP017995 |
REBASE acronym: Pag204
Org_num: 28763
All begin NIES204_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8250 | 490 aa hypothetical protein | |||
| 8260 | M | M.Pag2AORF1002P (100% identity) | M.Pag204ORF8260P | |
| 8270 | prevent-host-death family protein | |||
| 8280 | nucleotidyltransferase | |||
| 8290 | 77 aa unknown protein | |||
| 8300 | 136 aa hypothetical protein | |||
| 8310 | 65 aa hypothetical protein | |||
| 8320 | S | S.Pli48BORF13700P (40% identity) | S.Pag204ORF8260P | |
| 8330 | 71 aa hypothetical protein | |||
| 8340 | 85 aa hypothetical protein | |||
| 8350 | 137 aa hypothetical protein | |||
| 8360 | R | Pag66ORF326P (99% identity) | Pag204ORF8260P | |
| 8370 | 204 aa hypothetical protein | |||
| 13400 | 1-deoxy-D-xylulose-5-phosphate synthase | |||
| 13410 | M | M.Pag7811ORF1264P (100% identity) | M.Pag204ORF13410P | |
| 13420 | 60 aa hypothetical protein | |||
| 40530 | acetyl-CoA carboxylase, biotin carboxylase | |||
| 40540 | R | AplORF6670P (85% identity) | Pag204ORF40580P | |
| 40550 | 238 aa hypothetical protein | |||
| 40560 | 382 aa hypothetical protein | |||
| 40570 | S | S.Afr14755ORFAP (61% identity) | S.Pag204ORF40580P | |
| 40580 | M | M.SplZORFAP (84% identity) | M.Pag204ORF40580P | |
| 40600 | 39 aa hypothetical protein | |||
| plasmid plasmid2 | ||||
| 44660 | 371 aa hypothetical protein | |||
| 44670 | R | PagC7805ORF4457P (56% identity) | Pag204ORF44720P | |
| 44680 | 203 aa hypothetical protein | |||
| 44690 | 76 aa hypothetical protein | |||
| 44700 | 152 aa hypothetical protein | |||
| 44710 | S | S.Psp741ORF26925P (45% identity) | S.Pag204ORF44720P | |
| 44720 | M | M.Enu25634ORF13370P (50% identity) | M.Pag204ORF44720P | |
| 44730 | 182 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 570 | two-component hybrid sensor and regulator | |||
| 580 | C | C.PagC7805ORF3889P (100% identity) | C.Pag204ORF600P | |
| ??? | R | PagC7805ORF3889P (99% identity) | Pag204ORF600P | |
| 600 | M | M.PagC7805ORF3889P (100% identity) | M.Pag204ORF600P | |
| 610 | 610 aa hypothetical protein | |||
| 1410 | 562 aa hypothetical protein | |||
| 1420 | RM | Pag976ORF3194P (99% identity) | Pag204ORF1420P | |
| 1430 | phycobilisome core-membrane linker polypeptide | |||
| 1570 | GTP-binding protein | |||
| 1580 | M | M.Pag2AORF302P (94% identity) | M.Pag204ORF1580P | |
| 1590 | R | Pag2AORF302P (100% identity) | Pag204ORF1580P | |
| 1600 | ABC transporter related | |||
| 1920 | diaminopimelate decarboxylase | |||
| 1930 | M | M.Pag7811ORF82P (88% identity) | M.Pag204ORF1930P | |
| 1940 | 31 aa hypothetical protein | |||
| 2080 | DNA polymerase III, alpha subunit | |||
| 2090 | M | M.Pag976ORF3278P (99% identity) | M.Pag204ORF2090P | |
| 2100 | R | Pag1268ORF3496P (100% identity) | Pag204ORF2090P | |
| 2110 | 440 aa hypothetical protein | |||
| 6520 | ABC transporter ATP-binding protein | |||
| 6530 | M | M.Pag7811ORF569P (100% identity) | M.Pag204ORF6530P | |
| 6540 | uncharacterized protein, fragment | |||
| 6960 | ABC transporter related | |||
| 6970 | M | M.PagC7805ORF200P (100% identity) | M.Pag204ORF6970P | |
| 6980 | 293 aa hypothetical protein | |||
| 9110 | phosphoribosylamine--glycine ligase | |||
| ??? | M | M.Pag7805ORF3898P (93% identity) | M.Pag204ORF9120P | |
| 9150 | 123 aa hypothetical protein | |||
| 11340 | 241 aa hypothetical protein | |||
| 11350 | M | M.Pag976ORF4198P (100% identity) | M.Pag204ORF11350P | |
| 11370 | glycosyl transferase family 39 | |||
| 11910 | dihydroorotase | |||
| 11920 | M | M.Pag2AORF1375P (99% identity) | M.Pag204ORF11920P | |
| 11930 | deoxyribose-phosphate aldolase | |||
| 12430 | 40 aa hypothetical protein | |||
| 12440 | RM | Pag7811ORF1166P (98% identity) | Pag204ORF12440P | |
| 12450 | adenylate cyclase | |||
| 14390 | 598 aa hypothetical protein | |||
| 14400 | M | M.Pru7821ORF1769P (100% identity) | M.Pag204ORF14400P | |
| 14410 | transposase | |||
| 14420 | 102 aa hypothetical protein | |||
| 14430 | M | M.Pag7811ORF1364P (99% identity) | M.Pag204ORF14430P | |
| 14440 | 81 aa hypothetical protein | |||
| 16500 | glucose inhibited division protein A | |||
| 16510 | M | M.PagC7805ORF1879P (99% identity) | M.Pag204ORF16510P | |
| 16520 | glucose inhibited division protein A | |||
| 17050 | phosphoenolpyruvate synthase | |||
| 17060 | R | Pag2AORF1872P (100% identity) | Pag204ORF17070P | |
| 17070 | M | M.Pag365ORF2178P (100% identity) | M.Pag204ORF17070P | |
| 17080 | 95 aa hypothetical protein | |||
| 17520 | beta-ketoacyl synthase | |||
| 17530 | M | M.Pag7811ORF1679P (100% identity) | M.Pag204ORF17530P | |
| 17540 | 155 aa hypothetical protein | |||
| 17990 | GTP-binding protein EngA | |||
| 18000 | RM | Pag365ORF2087P (91% identity) | Pag204ORF18000P | |
| 18010 | 102 aa hypothetical protein | |||
| 18120 | 243 aa hypothetical protein | |||
| 18130 | M | M.Pag976ORF530P (92% identity) | M.Pag204ORF18130P | |
| 18140 | 56 aa hypothetical protein | |||
| 19620 | 97 aa hypothetical protein | |||
| 19630 | RM | Pag2AORF2132P (99% identity) | Pag204ORF19630P | |
| 19640 | MscS mechanosensitive ion channel family | |||
| 20600 | two-component response regulator | |||
| 20610 | M | M.Pag2AORF2230P (100% identity) | M.Pag204ORF20610P | |
| ??? | R | Pag2AORF2230P (99% identity) | Pag204ORF20610P | |
| 20640 | 103 aa hypothetical protein | |||
| 20690 | 74 aa hypothetical protein | |||
| 20700 | RM | Pag2AORF2239P (98% identity) | Pag204ORF20700P | |
| 20710 | 116 aa hypothetical protein | |||
| 23340 | ferredoxin-dependent glutamate synthase | |||
| 23350 | R | PagC7805ORF1153P (100% identity) | Pag204ORF23370P | |
| 23360 | 230 aa hypothetical protein | |||
| 23370 | M | M.PagC7805ORF1153P (100% identity) | M.Pag204ORF23370P | |
| 23380 | 40 aa hypothetical protein | |||
| 23720 | 430 aa hypothetical protein | |||
| 23730 | R | Pag66ORF1864P (100% identity) | Pag204ORF23740P | |
| 23740 | M | M.Pag2AORF2542P (100% identity) | M.Pag204ORF23740P | |
| 23750 | beta-Ig-H3/fasciclin | |||
| 23960 | 55 aa hypothetical protein | |||
| 23970 | M | M.Pag66ORF1887P (100% identity) | M.Pag204ORF23970P | |
| 23980 | 91 aa hypothetical protein | |||
| 24270 | 74 aa hypothetical protein | |||
| 24280 | M | M.Pag976ORF1171P (97% identity) | M.Pag204ORF24280P | |
| 24290 | binding-protein-dependent transport systems | |||
| 24700 | CO2 hydration protein | |||
| 24710 | RM | Pag976ORF1212P (91% identity) | Pag204ORF24710P | |
| 24720 | cell growth regulatory protein | |||
| 25590 | 29 aa hypothetical protein | |||
| 25600 | RM | Pag2AORF2725P (99% identity) | Pag204ORF25600P | |
| 25610 | 743 aa hypothetical protein | |||
| 26440 | 184 aa unknown protein | |||
| 26450 | M | M.Pag976ORF1392P (100% identity) | M.Pag204ORF26450P | |
| 26460 | cysteine desulfurase | |||
| 27810 | ferredoxin-sulfite reductase | |||
| 27820 | RM | Pag7811ORF2732P (99% identity) | Pag204ORF27820P | |
| 27830 | anthranilate phosphoribosyltransferase | |||
| 28680 | ribonuclease D | |||
| 28690 | M | M.PagC7805ORF630P (100% identity) | M.Pag204ORF28690P | |
| 28710 | metallophosphoesterase | |||
| 30290 | 521 aa hypothetical protein | |||
| 30300 | RM | Pag1268ORF1999P (99% identity) | Pag204ORF30300P | |
| 30310 | TPR domain protein | |||
| 30380 | 59 aa hypothetical protein | |||
| 30390 | R | Pag7811ORF2989P (71% identity) | Pag204ORF30400P | |
| 30400 | M | M.Pag7805ORF1739P (99% identity) | M.Pag204ORF30400P | |
| 30410 | methyltransferase type 11 | |||
| 30780 | fibrillin | |||
| ??? | R | Pag7805ORF1710P (100% identity) | Pag204ORF30800P | |
| ??? | M | M.Pag1268ORF2052P (99% identity) | M.Pag204ORF30800P | |
| 30820 | 226 aa hypothetical protein | |||
| 32870 | ATP-dependent Clp protease adaptor protein ClpS | |||
| 32880 | M | M.Pag7811ORF3227P (78% identity) | M.Pag204ORF32880P | |
| ??? | R | Pte9214ORF4246P (32% identity) | Pag204ORF32880P | |
| 32890 | C | C.Pte9214ORF4246P (98% identity) | C.Pag204ORF32880P | |
| 32900 | 611 aa hypothetical protein | |||
| 33010 | 426 aa hypothetical protein | |||
| 33020 | M | M.Pag976ORF2046P (100% identity) | M.Pag204ORF33020P | |
| 33030 | R | Pag976ORF2046P (100% identity) | Pag204ORF33020P | |
| 33040 | 169 aa hypothetical protein | |||
| 33850 | 223 aa hypothetical protein | |||
| 33860 | RM | Pag1268ORF2347P (98% identity) | Pag204ORF33860P | |
| 33870 | 139 aa hypothetical protein | |||
| 36520 | 72 aa hypothetical protein | |||
| 36530 | M | M.Pru82ORF142P (100% identity) | M.Pag204ORF36530P | |
| 36540 | adenosylhomocysteinase | |||
| 36570 | sugar fermentation stimulation protein | |||
| 36580 | M | M.PagC7805ORF3198P (100% identity) | M.Pag204ORF36580P | |
| 36590 | 238 aa hypothetical protein | |||
| 36640 | sodium/hydrogen exchanger | |||
| 36650 | RM | Pag7811ORF3607P (100% identity) | Pag204ORF36650P | |
| 36660 | 154 aa hypothetical protein | |||
| 37640 | two-component response regulator | |||
| 37650 | M | M.Pag976ORF2506P (99% identity) | M.Pag204ORF37650P | |
| 37660 | 30S ribosomal protein S15 | |||
| 39920 | HNH endonuclease family protein | |||
| 39930 | M | M.Pag7811DndCP (100% identity) | M.Pag204DndCP | |
| 39940 | 661 aa hypothetical protein | |||
| 39930 | 525 aa hypothetical protein | |||
| 39940 | M | M.Pag7811DndDP (100% identity) | M.Pag204DndDP | |
| 39950 | 133 aa hypothetical protein | |||
| 39940 | 661 aa hypothetical protein | |||
| 39950 | M | M.PagC7805DndEP (100% identity) | M.Pag204DndEP | |
| 39960 | 175 aa hypothetical protein | |||
| 42900 | photosystem I reaction center subunit Ib | |||
| 42910 | R | Pag7811ORF4197P (100% identity) | Pag204ORF42920P | |
| 42920 | M | M.Pag7811ORF4197P (100% identity) | M.Pag204ORF42920P | |
| 42930 | two-component sensor histidine kinase | |||
| plasmid plasmid1 | ||||
| 43950 | 940 aa hypothetical protein | |||
| 43960 | RM | Pag2AORF4330P (75% identity) | Pag204ORF43960P | |
| 43970 | 253 aa hypothetical protein | |||
| plasmid plasmid2 | ||||
| 44450 | 181 aa hypothetical protein | |||
| 44460 | M | M1.BsrBI (60% identity) | M1.Pag204ORF44460P | |
| 44470 | M | M2.BsrBI (53% identity) | M2.Pag204ORF44460P | |
| 44480 | R | 410 aa hypothetical protein | Pag204ORF44460P | |
| 44490 | C | C.Rsi800ORF2469P (56% identity) | C.Pag204ORF44460P | |
| 44500 | 337 aa hypothetical protein | |||
| 44550 | 206 aa hypothetical protein | |||
| 44560 | M | M.Pag758ORF3338BP (52% identity) | M.Pag204ORF44560P | |
| 44570 | PilT protein domain protein | |||
| 44890 | 957 aa hypothetical protein | |||
| 44900 | M | M.Pag1268ORF4508P (89% identity) | M.Pag204ORF44900P | |
| 44910 | 101 aa hypothetical protein | |||
| plasmid plasmid3 | ||||
| 45010 | 96 aa hypothetical protein | |||
| 45020 | RM | Pag66ORF4345P (90% identity) | Pag204ORF45020P | |
| 45030 | 119 aa hypothetical protein | |||
| plasmid plasmid4 | ||||
| 45610 | 147 aa hypothetical protein | |||
| 45620 | RM | Pag365ORF4368P (72% identity) | Pag204ORF45620P | |
| 45630 | 169 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18980 | 201 aa hypothetical protein | |||
| 18990 | M | M.Pag2AORF2064P (100% identity) | M.Pag204ORF18990P | |
| 19010 | 121 aa hypothetical protein | |||
| 34310 | 109 aa hypothetical protein | |||
| 34320 | M | M.PagC7805ORF2983P (100% identity) | M.Pag204ORF34320P | |
| 34330 | 109 aa hypothetical protein | |||
| plasmid plasmid3 | ||||
| 45070 | phage integrase family protein | |||
| 45080 | R | Osp6506ORF3410005P (87% identity) | Pag204ORF45110P | |
| 45090 | 232 aa hypothetical protein | |||
| 45100 | 451 aa hypothetical protein | |||
| 45110 | M | M.EsaRM26ORFAP (64% identity) | M.Pag204ORF45110P | |
| 45120 | MerR family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22720 | 213 aa hypothetical protein | |||
| 22730 | R | Pag7811McrBP (83% identity) | Pag204McrBP | |
| 22740 | R | Pag1268McrCP (96% identity) | Pag204McrCP | |
| 22750 | 62 aa hypothetical protein | |||