Geobacter sulfurreducens YM18 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Geobacter sulfurreducens YM18 RM systems
Ref: Inoue,K. et al. unpublished
REBASE ref # 26367
Complete sequence: 3,726,411 bp
GenBank #: AP017912
REBASE acronym: GsuYM18
Org_num: 28624
All begin YM18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 46 | DNA-invertase hin | |||
| 47 | R | DspT3ORF23870P (76% identity) | GsuYM18ORF49P | |
| 48 | 100 aa hypothetical protein | |||
| 49 | M | M.DspT3ORF23870P (85% identity) | M.GsuYM18ORF49P | |
| ??? | S | S.Mva003ORF22640P (41% identity) | S.GsuYM18ORF49P | |
| 51 | 590 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 217 | Glycolate permease GlcA | |||
| 218 | M | M.GsuAM1ORF10365P (98% identity) | M.GsuYM18ORF218P | |
| 219 | FKBP-type peptidyl-prolyl cis-trans isomerase | |||
| 547 | 73 aa hypothetical protein | |||
| 548 | M | M.Tfr970ORF2124P (59% identity) | M.GsuYM18ORF548P | |
| 549 | R | Dac2973ORF2453P (74% identity) | GsuYM18ORF548P | |
| 550 | 163 aa hypothetical protein | |||
| 1337 | 1021 aa hypothetical protein | |||
| 1338 | R | GsuPLORF6770P (90% identity) | GsuYM18ORF1338P | |
| 1339 | 306 aa hypothetical protein | |||
| 2096 | 1064 aa hypothetical protein | |||
| 2097 | RM | SfuMORF410P (52% identity) | GsuYM18ORF2097P | |
| 2098 | 209 aa hypothetical protein | |||
| 2511 | 642 aa hypothetical protein | |||
| 2512 | R | PmoA2ORFBP (56% identity) | GsuYM18ORF2513P | |
| 2513 | M | M.AspB1ORF6684P (42% identity) | M.GsuYM18ORF2513P | |
| 2514 | 205 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1334 | 784 aa hypothetical protein | |||
| 1335 | R | GsuAM1ORF16415P (91% identity) | GsuYM18ORF1335P | |
| 1336 | 583 aa hypothetical protein | |||
| 2102 | 250 aa hypothetical protein | |||
| 2103 | R | DreMMcrBP (24% identity) | GsuYM18McrBP | |
| 2104 | R | Mha6AcMcrCP (45% identity) | GsuYM18McrCP | |
| 2105 | Coupling protein TraD | |||