Pantoea vagans PV989 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pantoea vagans PV989 RM systems
Ref: Xu,L. et al. Int J Genomics (2018) In press
REBASE ref # 26406
| Sequence length: | GenBank #: | |
| Chromosome: | 4,071,006 bp | CP028349 |
| plasmid pPV989-94: | 93,831 bp | CP028352 |
REBASE acronym: Pva989
Org_num: 28757
All begin C9381_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4825 | 428 aa hypothetical protein | |||
| 4830 | S | S.KpnP015ORF22835P (58% identity) | S.Pva989ORF4835P | |
| 4835 | M | M.Kae61ORF21445P (98% identity) | M.Pva989ORF4835P | |
| 4840 | 128 aa hypothetical protein | |||
| 17020 | ABC transporter | |||
| 17025 | S | S.Pan188ORF9250P (92% identity) | S.Pva989ORF17030P | |
| 17030 | M | M.Pan188ORF9250P (97% identity) | M.Pva989ORF17030P | |
| 17035 | R | Ecos671ORFGP (92% identity) | Pva989ORF17030P | |
| 17040 | 289 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 720 | ribulose-phosphate 3-epimerase | |||
| 725 | M | M.PvaCDamP (100% identity) | M.Pva989DamP | |
| 730 | SPOR domain-containing protein | |||
| 9015 | 75 aa hypothetical protein | |||
| 9020 | M | M.Pva989ORF11580P (94% identity) | M.Pva989ORF9020P | |
| 9025 | 104 aa hypothetical protein | |||
| 11575 | 115 aa hypothetical protein | |||
| 11580 | M | M.PagAJ2bORF8215P (98% identity) | M.Pva989ORF11580P | |
| 11585 | 194 aa hypothetical protein | |||
| 13550 | 469 aa hypothetical protein | |||
| 13555 | M | M.Pan210ORF15700P (59% identity) | M.Pva989ORF13555P | |
| 13560 | Presumed portal vertex protein | |||
| 14200 | 91 aa hypothetical protein | |||
| 14205 | V | V.PvaMP7DcmP (100% identity) | V.Pva989DcmP | |
| 14210 | M | M.Psp3640DcmP (99% identity) | M.Pva989DcmP | |
| 14215 | Arc family DNA-binding protein | |||
| plasmid pPV989-94 | ||||
| 22670 | 76 aa hypothetical protein | |||
| 22190 | M | M.Pag47154ORF24365P (99% identity) | M.Pva989ORF22190P | |
| 22195 | 111 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4840 | 128 aa hypothetical protein | |||
| 4845 | R | CspC21McrCP (94% identity) | Pva989McrCP | |
| 4850 | R | PanB19McrBP (81% identity) | Pva989McrBP | |
| 4855 | 447 aa hypothetical protein | |||