Acidovorax avenae subsp. avenae COLB1 |
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Putative Acidovorax avenae subsp. avenae COLB1 RM systems
Ref: Zeng,Q. et al. Mol. Plant Microbe Interact. 30 (10), 813-828 (2017)
REBASE ref # 26303
Complete sequence: 5,574,324 bp
GenBank #: CP028291
REBASE acronym: AavCOLB1
Org_num: 28333
All begin C8234_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S1.AavSF12ORF60P (33% identity) | S1.AavCOLB1ORF50P | |
| 45 | S | S2.AavSF12ORF60P (100% identity) | S2.AavCOLB1ORF50P | |
| 50 | M | M.AavSF12ORF60P (100% identity) | M.AavCOLB1ORF50P | |
| 55 | R | AavSF12ORF60P (99% identity) | AavCOLB1ORF50P | |
| 60 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15020 | cryptochrome/photolyase family protein | |||
| 15025 | V | V.RsoRSCMORF35P (81% identity) | V.AavCOLB1ORF15035P | |
| 15030 | 77 aa hypothetical protein | |||
| 15035 | M | M.RsoRSCMORF35P (92% identity) | M.AavCOLB1ORF15035P | |
| 15040 | 972 aa hypothetical protein | |||
| 15035 | DNA (cytosine-5-)-methyltransferase | |||
| 15040 | RM | RsoRSCMORF40P (85% identity) | AavCOLB1ORF15040P | |
| 15045 | 241 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13895 | ATP-dependent helicase | |||
| 13900 | M | M.AavSH7ORF18330P (100% identity) | M.AavCOLB1ORF13900P | |
| 13905 | 375 aa hypothetical protein | |||
| 13910 | 216 aa hypothetical protein | |||
| 13915 | R | AavSH7ORF18330P (100% identity) | AavCOLB1ORF13900P | |
| 13920 | IS630 family transposase | |||