Salmonella enterica subsp. enterica serovar Typhimurium CFSAN018746 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN018746 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 26326
| Sequence length: | GenBank #: | |
| Chromosome: | 4,856,225 bp | CP028199 |
| plasmid pGMI14-001: | 95,983 bp | CP028200 |
REBASE acronym: Sen18746
Org_num: 28804
All begin C6650_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19020 | restriction endonuclease | |||
| 19015 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen18746IIP |
| 19010 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen18746II |
| 19005 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen18746II |
| 19000 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13490 | cell division protein DamX | |||
| 13485 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen18746DamP |
| 13480 | ribulose-phosphate 3-epimerase | |||
| 12975 | DUF2556 family protein | |||
| 12970 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen18746IV |
| 12965 | DNA-binding transcriptional regulator Fis | |||
| 3525 | phosphohydrolase | |||
| 3530 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen18746Dcm |
| 3535 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen18746DcmP |
| 3540 | drug/metabolite exporter YedA | |||
| 18840 | BREX system P-loop protein BrxC | |||
| 18835 | RM | StyUK1IV (100% identity) | GATCAG | Sen18746III |
| 18830 | AAA family ATPase | |||
| plasmid pGMI14-001 | ||||
| 24975 | 118 aa hypothetical protein | |||
| 24965 | M | M.StyUK1ORFAP (100% identity) | M.Sen18746ORF24965P | |
| 24960 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21310 | 33 aa hypothetical protein | |||
| 21305 | R | StyUK1IP (99% identity) | CAGAG | Sen18746IP |
| 21300 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen18746I |
| 21295 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19025 | BrnT family toxin | |||
| 19020 | R | StyUK1MrrP (100% identity) | Sen18746MrrP | |
| 19015 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9400 | TraR/DksA family transcriptional regulator | |||
| 9395 | M | M.StyLTORF13745P (100% identity) | GATC | M.Sen18746ORF9395P |
| 9390 | replication endonuclease | |||