Ethanoligenens harbinense YUAN-3 |
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Putative Ethanoligenens harbinense YUAN-3 RM systems
Ref: Li,Z. and Xing,D. unpublished
REBASE ref # 26363
Complete sequence: 3,009,515 bp
GenBank #: CP025286
REBASE acronym: EcoYUAN3
Org_num: 28612
All begin CXQ68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2435 | XRE family transcriptional regulator | |||
| 2440 | M | M.EhaX29ORF2445P (100% identity) | M.EcoYUAN3ORF2440P | |
| 2445 | cell filamentation protein Fic | |||
| 2450 | S | S1.EhaW1ORF2450P (100% identity) | S1.EcoYUAN3ORF2440P | |
| ??? | S | S3.EhaORF469P (100% identity) | S2.EcoYUAN3ORF2440P | |
| 2460 | integrase | |||
| 2465 | S | S2.EhaX29ORF2445P (100% identity) | S3.EcoYUAN3ORF2440P | |
| ??? | S | S3.EhaX29ORF2445P (90% identity) | S4.EcoYUAN3ORF2440P | |
| 2475 | R | EhaW1ORF2450P (100% identity) | EcoYUAN3ORF2440P | |
| 2480 | restriction endonuclease | |||
| 9235 | 105 aa hypothetical protein | |||
| 9240 | R | EhaX29ORF9685P (100% identity) | EcoYUAN3ORF9245P | |
| ??? | M | M.EhaX29ORF9685P (100% identity) | M.EcoYUAN3ORF9245P | |
| 9250 | DUF262 domain-containing protein | |||
| 9260 | DUF1837 domain-containing protein | |||
| 9265 | R | EhaX29ORF9715P (100% identity) | EcoYUAN3ORF9265P | |
| 9270 | S | S.EhaX29ORF9715P (100% identity) | S.EcoYUAN3ORF9265P | |
| 9275 | M | M.EhaX29ORF9715P (100% identity) | M.EcoYUAN3ORF9265P | |
| 9280 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6390 | 144 aa hypothetical protein | |||
| 6395 | V | V.EhaX29ORF6420P (100% identity) | V.EcoYUAN3ORF6410P | |
| ??? | R | R1.EhaX29ORF6420P (100% identity) | R1.EcoYUAN3ORF6410P | |
| 6405 | R | R2.EhaX29ORF6420P (100% identity) | R2.EcoYUAN3ORF6410P | |
| 6410 | M | M1.EhaX29ORF6420P (100% identity) | M.EcoYUAN3ORF6410P | |
| 6415 | DNA (cytosine-5-)-methyltransferase | |||
| 6410 | DNA (cytosine-5-)-methyltransferase | |||
| 6415 | M | M2.EhaX29ORF6420P (100% identity) | M.EcoYUAN3ORF6415P | |
| 6420 | DNA-binding protein | |||
| 8600 | 62 aa hypothetical protein | |||
| 8605 | R | EhaX29ORF8625P (100% identity) | EcoYUAN3ORF8610P | |
| 8610 | M | M.EhaX29ORF8630P (100% identity) | M.EcoYUAN3ORF8610P | |
| 8615 | 92 aa hypothetical protein | |||
| 9035 | PrgI family protein | |||
| ??? | M | M.EhaX29ORF9480P (100% identity) | M.EcoYUAN3ORF9040P | |
| 9045 | 131 aa hypothetical protein | |||
| 9370 | terminase | |||
| 9375 | M | M.EhaX29ORF9815P (100% identity) | M.EcoYUAN3ORF9375P | |
| 9380 | endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9815 | TIR domain-containing protein | |||
| 9820 | M | M.EhaX29ORF10260P (100% identity) | M.EcoYUAN3ORF9820P | |
| 9825 | ImmA/IrrE family metallo-endopeptidase | |||
| 9830 | DUF4411 domain-containing protein | |||
| 9835 | R | EhaX29ORF10260P (100% identity) | EcoYUAN3ORF9820P | |
| 9840 | DNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2475 | type I restriction endonuclease subunit R | |||
| 2480 | R | restriction endonuclease | EcoYUAN3Mrr2P | |
| 2485 | recombinase | |||
| 4960 | DUF2997 domain-containing protein | |||
| 4965 | R | EhaX29MrrP (100% identity) | EcoYUAN3MrrP | |
| 4970 | DUF2726 domain-containing protein | |||