Bacteroides thetaiotaomicron VPI-5482 |
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Putative Bacteroides thetaiotaomicron VPI-5482 RM systems
Ref: Beaulaurier,J. et al. Nat. Biotechnol. 36 (1), 61-69 (2018)
REBASE ref # 25194
Contig set: 6,481,410 bp
GenBank #: PUEO00000000 (NZ_PUEO00000000)
REBASE acronym: Bth5482
Org_num: 27864
All begin C5Z03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14640 | 272 aa hypothetical protein | |||
| 14645 | C | C.Bth935ORF18135P (100% identity) | C.Bth5482ORF14660P | |
| 14650 | DUF262 domain-containing protein | |||
| 14655 | R | Msa17ORFY1P (100% identity) | Bth5482ORF14660P | |
| 14660 | M | M.Msa17ORFY1P (100% identity) | M.Bth5482ORF14660P | |
| 14665 | S | S1.Msa17ORFY1P (100% identity) | S1.Bth5482ORF14660P | |
| 14670 | S | S3.BthVORF4518P (100% identity) | S2.Bth5482ORF14660P | |
| 14675 | integrase | |||
| 14680 | S | S3.Msa17ORFY1P (100% identity) | S3.Bth5482ORF14660P | |
| 14685 | restriction endonuclease | |||
| 14740 | transcriptional regulator | |||
| 14745 | R | Msa17ORFB2P (100% identity) | Bth5482ORF14760P | |
| 14750 | 307 aa hypothetical protein | |||
| 14755 | DUF262 domain-containing protein | |||
| 14760 | M | M.Msa17ORFB2P (100% identity) | M.Bth5482ORF14760P | |
| 14765 | cell filamentation protein Fic | |||
| 14770 | S | S1.Msa17ORFB2P (99% identity) | S1.Bth5482ORF14760P | |
| 14775 | S | S2.Msa17ORFB2P (100% identity) | S2.Bth5482ORF14760P | |
| 14780 | S | S3.Msa17ORFB2P (100% identity) | S3.Bth5482ORF14760P | |
| 14785 | S | S4.Msa17ORFB2P (100% identity) | S4.Bth5482ORF14760P | |
| 14790 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6835 | AraC family transcriptional regulator | |||
| 6840 | M | M.Msa17ORFTP (100% identity) | M.Bth5482ORF6840P | |
| 6845 | DGQHR domain-containing protein | |||
| 9010 | transposase | |||
| 9015 | RM | Msa17ORFE1P (97% identity) | Bth5482ORF9015P | |
| 9020 | 55 aa hypothetical protein | |||
| 12060 | 462 aa hypothetical protein | |||
| 12065 | M | M.Pvu626ORF9540P (100% identity) | M.Bth5482ORF12065P | |
| 12070 | ATP-binding protein | |||
| 12070 | ATP-binding protein | |||
| 12075 | RM | BthI5482ORF9380P (100% identity) | Bth5482ORF12075P | |
| 12080 | M | M.Msa17ORFV1P (100% identity) | M.Bth5482ORF12075P | |
| 12085 | site-specific integrase | |||
| 15215 | DNA modification methylase | |||
| 15220 | M | PxyORF2592P (96% identity) | M2.Bth5482ORF15215P | |
| 15225 | RM | Msa17ORFE2P (100% identity) | Bth5482ORF15215P | |
| 15230 | ATP-dependent helicase | |||
| 15895 | XRE family transcriptional regulator | |||
| 15900 | M | M.Msa17ORFGP (100% identity) | M.Bth5482ORF15900P | |
| 15905 | histidine kinase | |||