[Clostridium] bolteae ATCC BAA-613 |
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Putative [Clostridium] bolteae ATCC BAA-613 RM systems
Ref: Beaulaurier,J. et al. Nat. Biotechnol. 36 (1), 61-69 (2018)
REBASE ref # 25194
Contig set: 6,644,216 bp
GenBank #: PUEM00000000 (NZ_PUEM00000000)
REBASE acronym: Cbo613F
Org_num: 27860
All begin C5Z06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 215 | R | Msa17ORFS1P (84% identity) | Cbo613FORF220P | |
| 220 | M | M.Msa17ORFS1P (97% identity) | M.Cbo613FORF220P | |
| ??? | S | S2.Csp502ORF4666P (40% identity) | S1.Cbo613FORF220P | |
| 225 | S | S2.Msa17ORFS1P (97% identity) | S2.Cbo613FORF220P | |
| 230 | S | S1.Msa17ORFS1P (87% identity) | S3.Cbo613FORF220P | |
| 235 | S | S3.Ebo1231ORF14870P (100% identity) | S4.Cbo613FORF220P | |
| 240 | S | S4.Ebo1231ORF14870P (94% identity) | S5.Cbo613FORF220P | |
| 245 | site-specific integrase | |||
| 7405 | site-specific integrase | |||
| 7410 | S | S4.Ebo1231ORF14870P (94% identity) | S4.Cbo613FORF7430P | |
| 7415 | S | S3.Ebo1231ORF14870P (100% identity) | S3.Cbo613FORF7430P | |
| 7420 | S | S2.Msa17ORFS1P (100% identity) | S2.Cbo613FORF7430P | |
| 7425 | S | S1.Msa17ORFS1P (100% identity) | S1.Cbo613FORF7430P | |
| 7430 | M | M.Msa17ORFS1P (100% identity) | M.Cbo613FORF7430P | |
| 7435 | R | Msa17ORFS1P (100% identity) | Cbo613FORF7430P | |
| 7440 | XRE family transcriptional regulator | |||
| 23745 | 75 aa hypothetical protein | |||
| 23750 | M | M.PmeBin87ORFFP (100% identity) | M.Cbo613FORF23750P | |
| 23755 | 201 aa hypothetical protein | |||
| 23760 | S | S.PmeBin87ORFFP (100% identity) | S.Cbo613FORF23750P | |
| 23765 | 259 aa hypothetical protein | |||
| 23770 | 65 aa hypothetical protein | |||
| 23775 | 118 aa hypothetical protein | |||
| 23780 | R | PmeBin87ORFFP (100% identity) | Cbo613FORF23750P | |
| 23785 | C | C.PmeBin87ORFFP (55% identity) | C.Cbo613FORF23750P | |
| 23790 | recombinase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 730 | DUF2992 domain-containing protein | |||
| 735 | R | Ebo2ORF19175P (100% identity) | Cbo613FORF740P | |
| 740 | M | M2.Msa17ORFF2P (100% identity) | M1.Cbo613FORF740P | |
| 745 | M | M1.Msa17ORFF2P (96% identity) | M2.Cbo613FORF740P | |
| 750 | DUF305 domain-containing protein | |||
| 7465 | 100 aa hypothetical protein | |||
| 7470 | M | M.Msa17ORFR1P (84% identity) | M.Cbo613FORF7470P | |
| 7475 | PrgI family protein | |||
| 9680 | 145 aa hypothetical protein | |||
| 9685 | M | M.Msa17ORFMP (100% identity) | M.Cbo613FORF9685P | |
| 9690 | 60 aa hypothetical protein | |||
| 10545 | 287 aa hypothetical protein | |||
| ??? | M | M.Msa17ORFOP (100% identity) | M.Cbo613FORF10550P | |
| 10555 | PrgI family protein | |||
| 12130 | 477 aa hypothetical protein | |||
| ??? | RM | Msa17ORFL1P (100% identity) | Cbo613FORF12135P | |
| 12145 | S | S.Msa17ORFL1P (100% identity) | S.Cbo613FORF12135P | |
| 12150 | RluB protein | |||
| 13025 | RNA polymerase subunit sigma-70 | |||
| 13035 | M | M.Msa17ORFQP (100% identity) | M.Cbo613FORF13035P | |
| 13040 | phage portal protein | |||
| 15710 | CHAP domain-containing protein | |||
| 15715 | M | M.PmeBin85ORFGP (87% identity) | M.Cbo613FORF15715P | |
| 15720 | conjugal transfer protein TraE | |||
| 23015 | 0 aa hypothetical protein | |||
| ??? | M | M.Msa17ORFI1P (100% identity) | M.Cbo613FORF23020P | |
| 23030 | 74 aa hypothetical protein | |||
| 24000 | 102 aa hypothetical protein | |||
| 24005 | M | M.Msa17ORFC1P (100% identity) | M.Cbo613FORF24005P | |
| 24010 | 310 aa hypothetical protein | |||
| 24020 | 221 aa hypothetical protein | |||
| 24025 | M | M.Msa17ORFD1P (99% identity) | M.Cbo613FORF24025P | |
| 24030 | DUF3849 domain-containing protein | |||
| 28775 | 127 aa hypothetical protein | |||
| 28780 | M | M.Msa17ORFPP (100% identity) | M.Cbo613FORF28780P | |
| 28785 | 393 aa hypothetical protein | |||
| 30125 | 149 aa hypothetical protein | |||
| 30130 | M | M.Msa17ORFRP (100% identity) | M.Cbo613FORF30130P | |
| 30135 | 204 aa hypothetical protein | |||
| 30990 | XRE family transcriptional regulator | |||
| 30995 | M | M.Ebo1231ORF7825P (100% identity) | M.Cbo613FORF30995P | |
| 31000 | 257 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4130 | IS66 family insertion sequence hypothetical | |||
| 4135 | R | Msa17ORFB1P (100% identity) | Cbo613FORF4145P | |
| 4140 | 432 aa hypothetical protein | |||
| 4145 | M | M.Msa17ORFB1P (100% identity) | M.Cbo613FORF4145P | |
| 4150 | TIR domain-containing protein | |||
| 13845 | 93 aa hypothetical protein | |||
| ??? | M | M.Msa17ORFNP (100% identity) | M.Cbo613FORF13850P | |
| 13855 | DUF2634 domain-containing protein | |||
| 13860 | R | Msa17ORFNP (100% identity) | Cbo613FORF13850P | |
| 13865 | protein GlmU | |||