Bacteroides vulgatus ATCC 8492 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides vulgatus ATCC 8492 RM systems
Ref: Beaulaurier,J. et al. Nat. Biotechnol. 36 (1), 61-69 (2018)
REBASE ref # 25194
Contig set: 5,454,768 bp
GenBank #: PUEN00000000 (NZ_PUEN00000000)
REBASE acronym: Bvu8492
Org_num: 27861
All begin C5Z04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13345 | DUF4357 domain-containing protein | |||
| 13350 | C | C.Pvu1098ORF7795P (79% identity) | C.Bvu8492ORF13360P | |
| 13355 | R | PvuC06ORF3690P (97% identity) | Bvu8492ORF13360P | |
| 13360 | M | M.Pvu201ORF22395P (98% identity) | M.Bvu8492ORF13360P | |
| 13365 | S | S2.Pvu3C24ORF1046P (89% identity) | S1.Bvu8492ORF13360P | |
| 13370 | S | S3.Pvu3C24ORF1046P (100% identity) | S2.Bvu8492ORF13360P | |
| 13375 | integrase | |||
| ??? | S | S4.Pvu3C24ORF1046P (100% identity) | S3.Bvu8492ORF13360P | |
| 13385 | type I restriction endonuclease | |||
| 2335 | site-specific integrase | |||
| 2340 | S | S5.Msa17ORFA2P (100% identity) | S1.Bvu8492ORF2385P | |
| 2345 | S | S2.Pvu1098ORF10145P (100% identity) | S2.Bvu8492ORF2385P | |
| 2350 | S | S3.Pvu1098ORF10145P (100% identity) | S3.Bvu8492ORF2385P | |
| ??? | S | S2.Msa17ORFA2P (100% identity) | S4.Bvu8492ORF2385P | |
| 2360 | IS66-like element ISBvu3 family transposase | |||
| 2365 | IS66 family insertion sequence hypothetical | |||
| 2370 | IS66 family insertion sequence hypothetical | |||
| ??? | S | S5.Pvu1098ORF10145P (100% identity) | S5.Bvu8492ORF2385P | |
| ??? | S | S5.Msa17ORFA2P (45% identity) | S6.Bvu8492ORF2385P | |
| 2380 | cell filamentation protein Fic | |||
| 2385 | M | M1.Pvu1098ORF10145P (100% identity) | M.Bvu8492ORF2385P | |
| 2390 | R | Pvu1098ORF10145P (100% identity) | Bvu8492ORF2385P | |
| 2395 | C | C.Pvu1098ORF10145P (100% identity) | C.Bvu8492ORF2385P | |
| 5520 | DUF4357 domain-containing protein | |||
| 5525 | C | C.Pvu201ORF22395P (100% identity) | C.Bvu8492ORF5535P | |
| 5530 | R | PvuC06ORF3690P (100% identity) | Bvu8492ORF5535P | |
| 5535 | M | M.Pvu201ORF22395P (100% identity) | M.Bvu8492ORF5535P | |
| 5540 | S | S2.Pvu1098ORF7795P (100% identity) | S1.Bvu8492ORF5535P | |
| 5545 | S | S3.Pvu3C24ORF1046P (100% identity) | S2.Bvu8492ORF5535P | |
| ??? | S | S5.Pvu1098ORF7795P (100% identity) | S3.Bvu8492ORF5535P | |
| 5555 | integrase | |||
| 7935 | 454 aa hypothetical protein | |||
| 7940 | C | C.Pvu1098ORF10145P (100% identity) | C.Bvu8492ORF2385P | |
| 7945 | R | Pvu1098ORF10145P (100% identity) | Bvu8492ORF2385P | |
| 7950 | M | M1.Pvu1098ORF10145P (100% identity) | M.Bvu8492ORF2385P | |
| 7955 | cell filamentation protein Fic | |||
| ??? | S | S5.Msa17ORFA2P (100% identity) | S1.Bvu8492ORF2385P | |
| 7965 | S | S2.Pvu1098ORF10145P (100% identity) | S2.Bvu8492ORF2385P | |
| 7970 | S | S3.Pvu1098ORF10145P (100% identity) | S3.Bvu8492ORF2385P | |
| ??? | S | S2.Msa17ORFA2P (100% identity) | S4.Bvu8492ORF2385P | |
| 7980 | IS66 family transposase ISBvu3 | |||
| 7985 | IS66 family insertion sequence hypothetical | |||
| 7990 | IS66 family insertion sequence hypothetical | |||
| 7995 | S | S5.Pvu1098ORF10145P (100% identity) | S5.Bvu8492ORF2385P | |
| 8000 | site-specific integrase | |||
| 9325 | 0 aa hypothetical protein | |||
| ??? | C | C.Msa17ORFX1P (100% identity) | C.Bvu8492ORF9340P | |
| 9335 | 128 aa hypothetical protein | |||
| 9340 | M | M.Pvu1098ORF11445P (100% identity) | M.Bvu8492ORF9340P | |
| 9345 | S | S.Pvu1098ORF11445P (100% identity) | S.Bvu8492ORF9340P | |
| 9350 | DUF262 domain-containing protein | |||
| 9355 | R | Pvu1098ORF11445P (100% identity) | Bvu8492ORF9340P | |
| 9360 | ATP-dependent RecD-like DNA helicase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 830 | 64 aa hypothetical protein | |||
| 835 | M | M.Pvu1098ORF1230P (100% identity) | M.Bvu8492ORF835P | |
| 840 | 80 aa hypothetical protein | |||
| 7670 | AAA family ATPase | |||
| 7675 | M | M.Pvu1098ORF9885P (100% identity) | M.Bvu8492ORF7675P | |
| 7680 | 1222 aa hypothetical protein | |||