Xylella fastidiosa subsp. fastidiosa GB514 |
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Putative Xylella fastidiosa subsp. fastidiosa GB514 RM systems
Ref: Dowd,S.E. et al. unpublished
REBASE ref # 12037
Complete sequence: 2,491,203 bp
GenBank #: CP002165
REBASE acronym: Xfa514
Org_num: 6340
All begin XFLM_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4880 | 71 aa hypothetical protein | |||
| 4885 | R | Xfav13ORF11050P (100% identity) | Xfa514ORF4895P | |
| 4890 | S | S.Xfav13ORF11050P (100% identity) | S.Xfa514ORF4895P | |
| 4895 | M | M.Xfav13ORF11050P (100% identity) | M.Xfa514ORF4895P | |
| 4900 | 234 aa hypothetical protein | |||
| 4900 | 234 aa hypothetical protein | |||
| ??? | R | type I restriction-modification system endonuclease | Xfa514ORF4925P | |
| 4915 | S | S.Xfav13ORF11075P (100% identity) | S.Xfa514ORF4925P | |
| 4920 | 90 aa hypothetical protein | |||
| 4925 | M | M.Xfav13ORF11075P (100% identity) | M.Xfa514ORF4925P | |
| 4930 | amino acid transporter | |||
| 6510 | bifunctional aconitate hydratase | |||
| ??? | R | XfaTORF241P (100% identity) | Xfa514ORFBP | |
| ??? | S | S.Xfav13ORF1230P (100% identity) | S.Xfa514ORFBP | |
| ??? | M | M.XfaWM11ORF1245P (100% identity) | M.Xfa514ORFBP | |
| 6560 | 68 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 715 | phage-related lysozyme | |||
| 720 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa514ORF720P | |
| 725 | 79 aa hypothetical protein | |||
| 795 | protein tyrosine phosphatase | |||
| 800 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa514ORF800P | |
| 805 | plasmid maintenance system killer | |||
| 2290 | 135 aa hypothetical protein | |||
| 2300 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa514ORF2300P |
| 2305 | R | XfasSLORF8640P (100% identity) | TTCGAA | Xfa514ORF2300P |
| 2310 | type IV pilin | |||
| 2520 | 37 aa hypothetical protein | |||
| ??? | M | M.XfaTORF1649P (100% identity) | CCSGG | M.Xfa514ORFAP |
| 2535 | tryptophanyl-tRNA synthetase | |||
| 8375 | histidine kinase | |||
| 8380 | M | M.Xfav13ORF3100P (100% identity) | GTCGAC | M.Xfa514ORF8380P |
| 8385 | R | R1.Xfav13ORF3100P (100% identity) | GTCGAC | Xfa514ORF8380P |
| 8390 | 366 aa hypothetical protein | |||
| 11070 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | GCATGC | M.Xfa514ORFCP |
| 11085 | 190 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9845 | 69 aa hypothetical protein | |||
| 9850 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa514ORF9850P | |
| 9855 | R | Xfav13ORF4440P (100% identity) | Xfa514ORF9850P | |
| 9860 | alpha/beta hydrolase fold protein | |||