Salmonella enterica FDAARGOS_319 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica FDAARGOS_319 RM systems
Ref: Zhao,S. et al. unpublished
REBASE ref # 26299
| Sequence length: | GenBank #: | |
| Chromosome: | 4,776,422 bp | CP027412 |
| plasmid unnamed: | 232,341 bp | CP027411 |
REBASE acronym: Sen319
Org_num: 28794
All begin CEP97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5980 | endoribonuclease SymE | |||
| 5985 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen319II |
| 5990 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen319II |
| 5995 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen319IIP |
| 6000 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5795 | ATP-dependent helicase | |||
| 5800 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen319ORF5800P |
| 5815 | fosfomycin resistance glutathione transferase | |||
| 5820 | R | Sens12373ORF19550P (100% identity) | Sen319ORF5820P | |
| 5825 | 59 aa hypothetical protein | |||
| 11950 | DUF4060 domain-containing protein | |||
| 11955 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen319ORF11955P |
| 11960 | exonuclease | |||
| 17300 | drug/metabolite exporter YedA | |||
| 17305 | V | V.StyTDcmP (100% identity) | V.Sen319DcmP | |
| 17310 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen319DcmP |
| 17315 | phosphohydrolase | |||
| 24410 | Fis family transcriptional regulator | |||
| 24415 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen319III |
| 24420 | DUF2556 domain-containing protein | |||
| 24920 | ribulose-phosphate 3-epimerase | |||
| 24925 | M | M.StyTDamP (100% identity) | GATC | M.Sen319DamP |
| 24930 | cell division protein DamX | |||
| plasmid unnamed | ||||
| 615 | 284 aa hypothetical protein | |||
| 620 | M | M.YpsF1ORFDP (100% identity) | M.Sen319ORF620P | |
| 625 | DNA-binding protein | |||
| 1075 | thermonuclease family protein | |||
| 1080 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen319ORF1080P |
| 1085 | DUF1173 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8670 | MFS transporter | |||
| 8675 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen319I |
| 8680 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen319IP |
| 8685 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5995 | type I restriction-modification system | |||
| 6000 | R | StyUK1MrrP (100% identity) | Sen319MrrP | |
| 6005 | 95 aa hypothetical protein | |||