Xylella fastidiosa Salento-2 |
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Putative Xylella fastidiosa Salento-2 RM systems
Ref: Ramazzotti,M. et al. Phytopathol. Mediterr. (2018) In press
REBASE ref # 26212
Complete sequence: 2,508,296 bp
GenBank #: CP016610
REBASE acronym: XfaS2
Org_num: 27803
All begin BC375_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1235 | metal-dependent hydrolase | |||
| ??? | R | XfaS1ORF1255P (100% identity) | XfaS2ORF1265P | |
| 1260 | S | S.XfaS1ORF1255P (100% identity) | S.XfaS2ORF1265P | |
| ??? | M | M.XfaS1ORF1255P (100% identity) | M.XfaS2ORF1265P | |
| 1280 | 68 aa hypothetical protein | |||
| 10925 | 85 aa hypothetical protein | |||
| 10930 | R | XfaS1ORF10875P (100% identity) | XfaS2ORF10940P | |
| 10935 | S | S.XfaS1ORF10875P (100% identity) | S.XfaS2ORF10940P | |
| ??? | M | M.XfaS1ORF10875P (97% identity) | M.XfaS2ORF10940P | |
| 10950 | DEAD/DEAH box helicase | |||
| ??? | SAM-dependent DNA methyltransferase | |||
| 10950 | R | XfaS1ORF10900P (100% identity) | XfaS2ORF10965P | |
| 10955 | S | S.XfaS1ORF10900P (100% identity) | S.XfaS2ORF10965P | |
| 10960 | 0 aa hypothetical protein | |||
| 10965 | M | M.XfaS1ORF10900P (100% identity) | M.XfaS2ORF10965P | |
| 10970 | 65 aa hypothetical protein | |||
| 11010 | 69 aa hypothetical protein | |||
| 11015 | R | XfaS1ORF10965P (100% identity) | XfaS2ORF11025P | |
| 11020 | S | S.XfaS1ORF10965P (100% identity) | S.XfaS2ORF11025P | |
| 11025 | M | M.XfaS1ORF10965P (100% identity) | M.XfaS2ORF11025P | |
| 11030 | 84 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3215 | peptidase | |||
| 3220 | M | M.XfaS1ORF3195P (100% identity) | M.XfaS2ORF3220P | |
| 3225 | 79 aa hypothetical protein | |||
| 3280 | phosphotyrosine protein phosphatase | |||
| 3285 | M | M.XfaS1ORF3255P (100% identity) | M.XfaS2ORF3285P | |
| 3290 | 470 aa hypothetical protein | |||
| 5760 | 0 aa hypothetical protein | |||
| 5765 | M | M.XfaS1ORF5700P (100% identity) | M.XfaS2ORF5765P | |
| 5770 | Ax21 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4550 | 3-oxoacyl-ACP synthase III | |||
| 4555 | M | M.XfaS1ORF4510P (100% identity) | M.XfaS2ORF4555P | |
| 4560 | R | XfaS1ORF4510P (100% identity) | XfaS2ORF4555P | |
| 4565 | alpha/beta hydrolase | |||