Clostridioides difficile AK |
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Putative Clostridioides difficile AK RM systems
Ref: Kumar,A. et al. unpublished
REBASE ref # 26132
| Sequence length: | GenBank #: | |
| Chromosome: | 4,116,125 bp | CP027014 |
| plasmid pAK1: | 142,753 bp | CP027015 |
| plasmid pAK2: | 56,372 bp | CP027016 |
REBASE acronym: CdiAK
Org_num: 27802
All begin C4J70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14825 | DUF262 domain-containing protein | |||
| 14830 | R | Pdi9689IIP (100% identity) | CANNNNNNNTAAAG | CdiAKORF14855P |
| 14835 | 142 aa hypothetical protein | |||
| 14840 | nucleotidyltransferase domain-containing | |||
| 14845 | 102 aa hypothetical protein | |||
| 14850 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.CdiAKORF14855P |
| 14855 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.CdiAKORF14855P |
| 14860 | ketose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13535 | phospholipase | |||
| 13540 | M | M.Pdi9689I (100% identity) | CAAAAA | M.CdiAKORF13540P |
| 13545 | Rrf2 family transcriptional regulator | |||
| 15300 | LytTR family transcriptional regulator | |||
| 15305 | M | M.Pdi9689DndCP (100% identity) | M.CdiAKDndCP | |
| 15310 | DNA sulfur modification protein DndD | |||
| 15305 | DNA phosphorothioation system sulfurtransferase | |||
| 15310 | M | M.Pdi9689DndDP (100% identity) | M.CdiAKDndDP | |
| 15315 | DUF1832 domain-containing protein | |||
| 15310 | DNA sulfur modification protein DndD | |||
| 15315 | M | M.Pdi9689DndEP (100% identity) | M.CdiAKDndEP | |
| 15320 | 1078 aa hypothetical protein | |||
| plasmid pAK1 | ||||
| 19805 | PD-(D/E)XK nuclease family protein | |||
| 19810 | M | M1.Cdi267ORF19815P (100% identity) | M.CdiAKORF19810P | |
| 19815 | SsmT | |||
| 19810 | site-specific DNA-methyltransferase | |||
| 19815 | M | M.Pph1296ORF60P (100% identity) | M.CdiAKORF19815P | |
| 19820 | 127 aa hypothetical protein | |||
| plasmid pAK2 | ||||
| 20325 | CopY family transcriptional regulator | |||
| 20330 | M | M.Pdi9689ORF3833P (100% identity) | M.CdiAKORF20330P | |
| 20335 | N-acetylmuramoyl-L-alanine amidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10010 | AAA family ATPase | |||
| 10015 | R | Pdi9689McrCP (100% identity) | CdiAKMcrCP | |
| 10020 | R | Pdi9689McrBP (100% identity) | CdiAKMcrBP | |
| 10025 | cell division protein | |||