Vibrio alginolyticus ATCC 33868 |
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Putative Vibrio alginolyticus ATCC 33868 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 26191
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,418,310 bp | CP014053 |
| chromosome 2: | 1,810,594 bp | CP014054 |
| plasmid unnamed1: | 217,123 bp | CP014052 |
REBASE acronym: Val33868
Org_num: 27664
All begin AL539_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 22330 | 477 aa hypothetical protein | |||
| 22335 | M | M.ValV208ORF15580P (100% identity) | TCANNNNNNNTGGG | M.Val33868V |
| 22340 | S | S.ValV208ORF15580P (100% identity) | TCANNNNNNNTGGG | S.Val33868V |
| 22345 | R | ValV208ORF25795P (100% identity) | TCANNNNNNNTGGG | Val33868VP |
| 22350 | Reverse transcriptase (RNA-dependent DNA | |||
| 23880 | M48 family peptidase | |||
| 23885 | R | Vpa18ORF2300P (98% identity) | YTCANNNNNNRTAG | Val33868IIIP |
| 23890 | S | S.VdiNV27ORF3150P (62% identity) | YTCANNNNNNRTAG | S.Val33868III |
| 23895 | M | M2.VpaFB11ORF12235P (98% identity) | YTCANNNNNNRTAG | M.Val33868III |
| 23900 | 146 aa hypothetical protein | |||
| chromosome 2 | ||||
| 7435 | 61 aa hypothetical protein | |||
| 7440 | R | VpaIsc7ORF6190P (99% identity) | ACAYNNNNGTC | Val33868IIP |
| 7445 | HrgA protein | |||
| 7450 | 423 aa hypothetical protein | |||
| 7455 | S | S.VowVC2WORF8535P (99% identity) | ACAYNNNNGTC | S.Val33868II |
| 7460 | M | M.VowVC2WORF8535P (99% identity) | ACAYNNNNGTC | M.Val33868II |
| 7465 | integrase | |||
| plasmid unnamed1 | ||||
| 8560 | M48 family peptidase | |||
| 8565 | R | Val666ORF314P (99% identity) | GCTANNNNNNNTTGY | Val33868IVP |
| 8570 | 285 aa hypothetical protein | |||
| 8575 | S | S1.VpaX1ORF12705P (57% identity) | GCTANNNNNNNTTGY | S.Val33868IV |
| 8580 | M | M.ValZJORF6360P (97% identity) | GCTANNNNNNNTTGY | M.Val33868IV |
| 8585 | pyrophosphatase | |||
| 9005 | pyrophosphatase | |||
| 9010 | M | M.Mmo365III (98% identity) | TGACNNNNNRTC | M.Val33868VI |
| 9015 | S | S.Vca4131ORF19065P (61% identity) | TGACNNNNNRTC | S.Val33868VI |
| 9020 | 291 aa hypothetical protein | |||
| 9025 | GTP-binding protein HSR1 | |||
| 9030 | 368 aa hypothetical protein | |||
| 9035 | R | Mmo365IIIP (97% identity) | TGACNNNNNRTC | Val33868VIP |
| 9040 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 18490 | ribulose-phosphate 3-epimerase | |||
| 18495 | M | M.Vspsp1DamP (100% identity) | GATC | M.Val33868Dam |
| 18500 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 8730 | 80 aa hypothetical protein | |||
| 8735 | M | M.Vpa0051ORF27435P (100% identity) | M.Val33868ORF8735P | |
| 8740 | 91 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 9670 | 191 aa hypothetical protein | |||
| 9675 | R | Vfu6766ORFEP (99% identity) | GTGATG | Val33868IP |
| 9680 | M | M.VpaLH80ORF20005P (62% identity) | GTGATG | M.Val33868I |
| 9685 | 61 aa hypothetical protein | |||