Mycoplasma hyorhinis HUB-1 |
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Putative Mycoplasma hyorhinis HUB-1 RM systems
Ref: Liu,W. et al. unpublished
REBASE ref # 12069
Complete sequence: 839,615 bp
GenBank #: CP002170 (NC_014448)
REBASE acronym: MhyHUB
Org_num: 6296
All begin MHR_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 199 | uncharacterized protein | |||
| 200 | S | S.MhyHUBORF202P (33% identity) | S.MhyHUBORF200AP | |
| 201 | S | S.MhyHUBORF375P (55% identity) | S.MhyHUBORF200BP | |
| 202 | Restriction endonuclease S subunits | |||
| 201 | Type I site-specific DNA methyltransferase | |||
| 202 | S | S.Mhy5820ORF1580P (98% identity) | S.MhyHUBORF202P | |
| 203 | DNA mismatch repair protein | |||
| 328 | Expressed protein | |||
| 329 | R | Mmy165415ORF2100P (20% identity) | MhyHUBORF330P | |
| 330 | M | Type I restriction-modification system | M.MhyHUBORF330P | |
| 331 | pseudogene | |||
| 372 | pseudogene | |||
| 374 | S | S.Mhy10121ORF240P (99% identity) | S.MhyHUBORF374P | |
| 375 | Type I site-specific DNA methyltransferase | |||
| 374 | Restriction endonuclease S subunits | |||
| 375 | S | S.Mhy5820ORF7470P (93% identity) | S.MhyHUBORF375P | |
| 376 | 50S ribosomal protein L17 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32 | tRNA-specific 2-thiouridylase mnmA | |||
| 33 | M | M.Mhy76ORF39P (100% identity) | CG | M.MhyHUBORF33P |
| 34 | uncharacterized protein | |||
| 70 | GTP-binding protein lepA | |||
| 71 | M | M.MhyN20cORF380P (100% identity) | RCATGY | M.MhyHUBORF71P |
| 72 | 226 aa hypothetical protein | |||
| 202 | Restriction endonuclease S subunits | |||
| 203 | R | Mhy76ORF228P (97% identity) | GATC | MhyHUBORF204P |
| 204 | M | M.MhyN20cORF1050P (99% identity) | GATC | M.MhyHUBORF204P |
| 205 | Aminopeptidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 173 | transposase, IS861 | |||
| 174 | R | MhyIPVORF217P (98% identity) | MhyHUBORF175P | |
| 175 | M | M2.Mhy5820ORF1720P (62% identity) | M.MhyHUBORF175P | |
| 176 | type III restriction-modification | |||
| 175 | Type III restriction-modification system | |||
| 176 | M | M3.MhyF72CORF1920P (97% identity) | M.MhyHUBORF176P | |
| 177 | Site-specific DNA-methyltransferase, | |||
| 176 | type III restriction-modification | |||
| 177 | M | M1.Mhy5820ORF1720P (62% identity) | M.MhyHUBORF177AP | |
| ??? | M | M2.Mmy165415ORF2970P (11% identity) | M.MhyHUBORF177BP | |
| ??? | M | M3.MhyIPVORF217P (8% identity) | M.MhyHUBORF177CP | |
| 178 | type III restriction-modification | |||
| ??? | Type III restriction-modification system: methylase | |||
| 178 | M | M3.Mhy49388ORF925P (62% identity) | M.MhyHUBORF178AP | |
| ??? | M | M2.Mhy5820ORF1720P (15% identity) | M.MhyHUBORF178BP | |
| 179 | adenine DNA methyltransferase subunit | |||
| ??? | Type III restriction-modification system: methylase | |||
| 179 | M | M3.Mhy1050ORF200P (65% identity) | M.MhyHUBORF179AP | |
| 180 | M | M1.MhyF72CORF1920P (21% identity) | M.MhyHUBORF179BP | |
| 181 | pseudogene | |||