Clostridioides difficile R1 |
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Putative Clostridioides difficile R1 RM systems
Ref: Kumar,A. et al. unpublished
REBASE ref # 26132
Complete sequence: 4,093,143 bp
GenBank #: CP026613
REBASE acronym: CdiR1
Org_num: 27485
All begin C4E25_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1930 | 61 aa hypothetical protein | |||
| 1935 | M | M2.CdiR3ORF3495P (100% identity) | M1.CdiR1ORF1935P | |
| 1940 | R | CdiR3ORF3495P (100% identity) | CdiR1ORF1935P | |
| 1945 | M | M1.CdiR3ORF3495P (100% identity) | M2.CdiR1ORF1935P | |
| 1950 | IS1182 family transposase | |||
| 2040 | DUF4366 domain-containing protein | |||
| ??? | M | M.Pdi105ORFBP (100% identity) | M.CdiR1ORF2045P | |
| 2050 | DNA topoisomerase III | |||
| 7105 | patatin-like phospholipase family protein | |||
| 7110 | M | M.Pdi120I (100% identity) | CAAAAA | M.CdiR1ORF7110P |
| 7115 | Rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3490 | AAA family ATPase | |||
| 3495 | R | Pdi120McrCP (100% identity) | CdiR1McrCP | |
| 3500 | R | Pdi120McrBP (100% identity) | CdiR1McrBP | |
| 3505 | cell division protein | |||