Francisella tularensis subsp. novicida TCH2015 |
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Putative Francisella tularensis subsp. novicida TCH2015 RM systems
Ref: Matz,L.M. et al. Diagn. Microbiol. Infect. Dis. (2018) In press
REBASE ref # 26127
Complete sequence: 2,000,087 bp
GenBank #: CP021490
REBASE acronym: Ftu2015
Org_num: 27469
All begin B4919_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6895 | hydrolase | |||
| 6900 | R | Ftu10ORF788P (99% identity) | TCANNNNNNNTGAA | Ftu2015IIP |
| 6905 | 307 aa hypothetical protein | |||
| 6910 | four helix bundle protein | |||
| 6915 | S | S.Fsp7296ORF4685P (38% identity) | TCANNNNNNNTGAA | S1.Ftu2015II |
| 6920 | S | S.PspNJDZ02ORF18535P (23% identity) | TCANNNNNNNTGAA | S2.Ftu2015II |
| 6925 | 180 aa hypothetical protein | |||
| 6930 | 130 aa hypothetical protein | |||
| 6935 | M | M.Ftu10ORF788P (99% identity) | TCANNNNNNNTGAA | M.Ftu2015II |
| 6940 | type I restriction endonuclease subunit S | |||
| 9180 | activator of osmoprotectant transporter prop | |||
| 9190 | R | Ftu9876ORF590P (99% identity) | GAAYNNNNNTGT | Ftu2015IP |
| 9195 | cell filamentation protein Fic | |||
| 9200 | 206 aa hypothetical protein | |||
| 9205 | 368 aa hypothetical protein | |||
| 9210 | 472 aa hypothetical protein | |||
| 9215 | S | S.Fsp77308ORF300P (57% identity) | GAAYNNNNNTGT | S.Ftu2015I |
| 9220 | 332 aa hypothetical protein | |||
| 9225 | M | M.Ftu7470ORF260P (99% identity) | GAAYNNNNNTGT | M.Ftu2015I |
| 9230 | SPFH domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1425 | phosphoribosylformylglycinamidine synthase | |||
| 1430 | R | FtnUIV (98% identity) | GATC | Ftu2015ORF1430P |
| 1435 | galactose mutarotase | |||
| 6325 | 455 aa hypothetical protein | |||
| 6330 | RM | FtuFAIORF1196P (66% identity) | Ftu2015ORF6330P | |
| 6335 | 1259 aa hypothetical protein | |||
| 8065 | IS1595 family transposase | |||
| 8070 | RM | FphPORF335P (66% identity) | Ftu2015ORF8070P | |
| 8075 | glycine dehydrogenase | |||