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Putative Aeromonas species ASNIH4 RM systems
Ref: Weingarten,R.A. et al. MBio 9 (1) (2018) In press
REBASE ref # 26109
Sequence length: | GenBank #: | |
Chromosome: | 5,216,518 bp | CP026217 |
plasmid pAER-1351: | 27,298 bp | CP026218 |
plasmid pAER-a82d: | 29,846 bp | CP026220 |
REBASE acronym: AspNIH4
Org_num: 27453
All begin C2U40_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2735 | 134 aa hypothetical protein | |||
2740 | M | M.AalK520ORF15930P (99% identity) | GTCANNNNNTTC | M.AspNIH4VII |
2745 | S | S.AalK520ORF2990P (65% identity) | GTCANNNNNTTC | S.AspNIH4VII |
??? | ATPase | |||
2750 | ATPase | |||
2755 | restriction endonuclease | |||
2760 | R | AalK520ORF2990P (91% identity) | GTCANNNNNTTC | AspNIH4VIIP |
2765 | ATP-binding protein | |||
4690 | ATP-dependent DNA helicase | |||
4695 | M | M.PaeWGH6ORF25655P (96% identity) | CGANNNNNNNRTGT | M.AspNIH4V |
4700 | S | S.EcoCT01ORF24695P (76% identity) | CGANNNNNNNRTGT | S.AspNIH4V |
4705 | anticodon nuclease | |||
4710 | R | PaeWGH6ORF25655P (96% identity) | CGANNNNNNNRTGT | AspNIH4VP |
4715 | NTPase KAP | |||
14245 | metal-dependent hydrolase | |||
14250 | R | AmeT58ORF17245P (99% identity) | AspNIH4ORF14270P | |
14255 | Appr-1-p processing protein | |||
14260 | DUF4433 domain-containing protein | |||
14265 | S | S.Ave32286ORFKP (68% identity) | S.AspNIH4ORF14270P | |
14270 | M | M.Ave951ORF19295P (99% identity) | M.AspNIH4ORF14270P | |
14275 | 148 aa hypothetical protein | |||
16495 | 99 aa hypothetical protein | |||
16500 | M | M.Aca497ORF39670P (97% identity) | AAGNNNNNGATR | M.AspNIH4IV |
16505 | S | S.Aca497ORF39670P (54% identity) | AAGNNNNNGATR | S.AspNIH4IV |
16510 | R | RplWA001ORF26965P (98% identity) | AAGNNNNNGATR | AspNIH4IVP |
16515 | ISL3 family transposase | |||
18975 | metal-dependent hydrolase | |||
18980 | R | AcaK524ORF5965P (98% identity) | AGCANNNNNNNTCG | AspNIH4VIP |
18985 | Appr-1-p processing protein | |||
18990 | DUF4433 domain-containing protein | |||
18995 | S | S.Adh62ORF32010P (65% identity) | AGCANNNNNNNTCG | S.AspNIH4VI |
19000 | M | M.Ave22TTORF16560P (99% identity) | AGCANNNNNNNTCG | M.AspNIH4VI |
19005 | transcription factor | |||
22610 | transcriptional regulator | |||
22615 | R | Aca398ORFAP (99% identity) | ACAYNNNNNTGA | AspNIH4VIIIP |
22620 | 763 aa hypothetical protein | |||
22625 | 249 aa hypothetical protein | |||
22630 | 639 aa hypothetical protein | |||
22635 | S | S.Aca398ORFAP (67% identity) | ACAYNNNNNTGA | S.AspNIH4VIII |
22640 | M | M.Aca398ORFAP (92% identity) | ACAYNNNNNTGA | M.AspNIH4VIII |
22645 | WYL domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4475 | cell division protein DamX | |||
4480 | M | M.AspCDDamP (100% identity) | GATC | M.AspNIH4Dam |
4485 | ribulose-phosphate 3-epimerase | |||
16565 | 627 aa hypothetical protein | |||
16570 | RM | Ahy78I (100% identity) | AAGAACB | AspNIH4III |
16575 | 180 aa hypothetical protein | |||
plasmid pAER-1351 | ||||
24580 | recombinase family protein | |||
24585 | M | M.Ahy45096ORF295P (100% identity) | CTCGAG | M.AspNIH4II |
24590 | R | Vfi15551ORF3539P (100% identity) | CTCGAG | AspNIH4IIP |
24595 | 82 aa hypothetical protein | |||
plasmid pAER-a82d | ||||
25035 | 72 aa hypothetical protein | |||
25040 | M | M.Psp12121ORF31910P (99% identity) | CGGCCG | M.AspNIH4I |
25045 | R | Psp12121ORF31910P (97% identity) | CGGCCG | AspNIH4IP |
25050 | 70 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2745 | restriction endonuclease subunit S | |||
??? | R | AalK520McrB2P (99% identity) | AspNIH4McrBP | |
2755 | R | AalK520McrC2P (92% identity) | AspNIH4McrCP | |
2760 | DEAD/DEAH box helicase |