Prevotella melaninogenica ATCC 25845 |
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Putative Prevotella melaninogenica ATCC 25845 RM systems
Ref: Harkins,D.M. et al. unpublished
REBASE ref # 11621
| Sequence length: | GenBank #: | |
| chromosome I: | 1,796,408 bp | CP002122 (NC_014370) |
| chromosome II: | 1,371,874 bp | CP002123 (NC_014371) |
REBASE acronym: PmeO
Org_num: 6127
All begin HMPREF0659_A
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 5720 | 154 aa hypothetical protein | |||
| 5723 | R | Pme306ORF3855P (100% identity) | PmeOORF5726P | |
| 5724 | S | S.Pme306ORF3855P (100% identity) | S.PmeOORF5726P | |
| 5725 | death-on-curing family protein | |||
| 5726 | 50 aa hypothetical protein | |||
| 5727 | M | M.Pme1566ORF3120P (100% identity) | M.PmeOORF5726P | |
| 5728 | C | C.Pme306ORF3855P (100% identity) | C.PmeOORF5726P | |
| 5729 | 222 aa hypothetical protein | |||
| 6115 | Ser/Thr phosphatase family protein | |||
| 6116 | R | Pme306IIP (100% identity) | PmeOORF6123P | |
| 6117 | 211 aa hypothetical protein | |||
| 6118 | type I restriction modification DNA specificity | |||
| 6119 | S | S2.Pme306II (100% identity) | S.PmeOORF6123P | |
| 6120 | cell filamentation protein Fic | |||
| 6121 | type I restriction modification DNA specificity | |||
| 6122 | site-specific recombinase, phage integrase | |||
| 6123 | M | M.Pme306II (100% identity) | M.PmeOORF6123P | |
| 6124 | C | C.Pme306IIP (100% identity) | C.PmeOORF6123P | |
| 6125 | 220 aa hypothetical protein | |||
| 6117 | 211 aa hypothetical protein | |||
| 6118 | S | S1.Pme306IIP (100% identity) | S.PmeOORF6118P | |
| 6119 | type I restriction modification DNA specificity | |||
| 6120 | cell filamentation protein Fic | |||
| 6121 | S | S3.Pme306IIP (100% identity) | S.PmeOORF6121P | |
| 6122 | site-specific recombinase, phage integrase | |||
| chromosome II | ||||
| 7005 | 524 aa hypothetical protein | |||
| 7006 | M | M.Pme306III (100% identity) | M.PmeOORF7006P | |
| 7007 | S | S.Pme306III (100% identity) | S.PmeOORF7006P | |
| 7008 | R | Pme306IIIP (100% identity) | PmeOORF7006P | |
| 7009 | 381 aa hypothetical protein | |||
| 7321 | plasmid maintenance system killer protein | |||
| ??? | C | C.PinZORFCP (92% identity) | C.PmeOORF7324P | |
| 7322 | R | Pme306IP (100% identity) | PmeOORF7324P | |
| 7323 | 216 aa hypothetical protein | |||
| 7324 | M | M.Pme306I (100% identity) | M.PmeOORF7324P | |
| 7325 | 702 aa hypothetical protein | |||
| 7326 | divergent AAA domain protein | |||
| 7327 | S | S1.Pme306I (100% identity) | S1.PmeOORF7324P | |
| 7328 | S | S2.Pme306IP (100% identity) | S2.PmeOORF7324P | |
| 7329 | site-specific recombinase, phage integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 5836 | 348 aa hypothetical protein | |||
| 5837 | RM | Pme306ORF4430AP (99% identity) | PmeOORF5837P | |
| 5838 | Eco57I restriction endonuclease | |||
| 5837 | 331 aa hypothetical protein | |||
| 5838 | RM | Pme306ORF4430BP (100% identity) | PmeOORF5838P | |
| 5839 | 309 aa hypothetical protein | |||
| 5942 | HNH endonuclease domain protein | |||
| 5943 | M | M.Pme306ORF4980P (100% identity) | M.PmeOORF5943P | |
| 5944 | 482 aa hypothetical protein | |||
| 6256 | helicase C-terminal domain protein | |||
| 6257 | RM | Pme306ORF6625P (100% identity) | PmeOORF6257P | |
| 6258 | 217 aa hypothetical protein | |||
| chromosome II | ||||
| 7333 | 322 aa hypothetical protein | |||
| 7334 | R | Pme306ORF8815P (100% identity) | PmeOORF7336P | |
| 7335 | 521 aa hypothetical protein | |||
| 7336 | M | M.Pme306ORF8815P (100% identity) | M.PmeOORF7336P | |
| 7337 | C | C.Pme306ORF8815P (100% identity) | C.PmeOORF7336P | |
| 7338 | integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome II | ||||
| 7324 | type I restriction-modification system, M | |||
| 7325 | R | ScoHDE06GmrSDP (79% identity) | PmeOGmrSDP | |
| 7326 | divergent AAA domain protein | |||