Desulfarculus baarsii DSM 2075 |
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Putative Desulfarculus baarsii DSM 2075 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14277
Complete sequence: 3,655,731 bp
GenBank #: CP002085 (NC_014365)
REBASE acronym: DbaK
Org_num: 6120
All begin Deba_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2536 | 68 aa conserved hypothetical protein | |||
| 2537 | R | Dsp107105ORF14835P (99% identity) | GCCNNNNNCTTC | DbaKIP |
| 2538 | S | S.CliFORF8690P (86% identity) | GCCNNNNNCTTC | S.DbaKI |
| 2539 | DNA-damage-inducible protein D | |||
| 2540 | M | M2.DspG11ORF3930P (90% identity) | GCCNNNNNCTTC | M2.DbaKI |
| 2541 | 151 aa conserved hypothetical protein | |||
| 2542 | M | M1.GbaNRL1ORF6110P (98% identity) | GCCNNNNNCTTC | M1.DbaKI |
| 2543 | DNA binding domain protein, excisionase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | 120 aa conserved hypothetical protein | |||
| 1816 | M | M.Kgl21ORF709P (98% identity) | GGATC | M.DbaKORF1816P |
| 1817 | 117 aa conserved hypothetical protein | |||
| 2555 | transcriptional regulator, XRE family | |||
| 2556 | M | M.Dsp106783ORF15195P (95% identity) | M.DbaKORF2556P | |
| 2557 | HNH endonuclease | |||
| 2569 | bacteriophage related protein | |||
| 2570 | V | V.SfuMORF3853P (78% identity) | V.DbaKORF2578P | |
| 2571 | R | SfuMORF3853P (99% identity) | GTCGAC | DbaKORF2578P |
| 2572 | phospholipase D/Transphosphatidylase | |||
| 2573 | Protein of unknown function DUF1998 | |||
| 2574 | helicase domain protein | |||
| 2575 | 1366 aa hypothetical protein | |||
| 2576 | 211 aa hypothetical protein | |||
| 2577 | helicase domain protein | |||
| 2578 | M | M.SfuMORF3845P (97% identity) | GTCGAC | M.DbaKORF2578P |
| 2579 | phage transcriptional regulator, AlpA | |||
| 2574 | helicase domain protein | |||
| 2575 | RM | SfuMORF3847P (55% identity) | DbaKORF2575P | |
| 2576 | 211 aa hypothetical protein | |||
| 2591 | transcriptional regulator, XRE family | |||
| 2592 | M | M2.CsaHT4ORFHP (50% identity) | M1.DbaKORF2592P | |
| 2593 | M | M.Dsp107105ORF14900P (89% identity) | M2.DbaKORF2592P | |
| 2594 | HNH endonuclease | |||
| 2955 | Radical SAM domain protein | |||
| 2956 | M | M.GprBW2ORF12500P (80% identity) | RGATCY | M.DbaKORF2956P |
| 2957 | R | MspMc7ORF8940P (70% identity) | DbaKORF2956P | |
| 2958 | Porphobilinogen synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1597 | phage head morphogenesis protein, SPP1 gp7 | |||
| 1598 | R | Sse17993ORFCP (72% identity) | DbaKORF1599P | |
| 1599 | M | M.Rsp17631ORF7526P (65% identity) | M.DbaKORF1599P | |
| 1600 | 126 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1181 | DegT/DnrJ/EryC1/StrS aminotransferase | |||
| 1182 | R | SliSMrrP (27% identity) | DbaKMrrP | |
| 1183 | 209 aa hypothetical protein | |||
| 2029 | ABC transporter related protein | |||
| 2030 | R | Tca21228MrrP (50% identity) | DbaKMrr2P | |
| 2031 | Choloylglycine hydrolase | |||