Vibrio campbellii BoB-90 |
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Putative Vibrio campbellii BoB-90 RM systems
Ref: Colston,S.M. et al. unpublished
REBASE ref # 27141
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,641,970 bp | CP026315 |
| plasmid unnamed 2: | 74,233 bp | CP026318 |
REBASE acronym: VcaBoB90
Org_num: 27353
All begin C1N51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 990 | phospholipase | |||
| 995 | M | M.Vvu167680ORFBP (97% identity) | M.VcaBoB90ORF995P | |
| 1000 | 269 aa hypothetical protein | |||
| 1005 | 579 aa hypothetical protein | |||
| 1010 | S | S.VspMAO6ORF41050P (71% identity) | S.VcaBoB90ORF995P | |
| 1015 | R | Vvu167680ORFBP (99% identity) | VcaBoB90ORF995P | |
| 1020 | restriction endonuclease | |||
| 2030 | M48 family peptidase | |||
| 2035 | R | Vninig3ORF53760P (83% identity) | VcaBoB90ORF2055P | |
| 2040 | TIGR02646 family protein | |||
| 2045 | ATP-binding protein | |||
| 2050 | S | S1.AcaVA2ORF520P (44% identity) | S.VcaBoB90ORF2055P | |
| 2055 | M | M.MviHORF3565P (76% identity) | M.VcaBoB90ORF2055P | |
| 2060 | 196 aa hypothetical protein | |||
| 3425 | M48 family peptidase | |||
| 3430 | R | VcaLB102ORF20660P (99% identity) | VcaBoB90ORF3445P | |
| 3435 | 344 aa hypothetical protein | |||
| 3440 | S | S.Csp4105ORF73310P (33% identity) | S.VcaBoB90ORF3445P | |
| 3445 | M | M.VspB183ORF2435P (94% identity) | M.VcaBoB90ORF3445P | |
| 3450 | DUF4433 domain-containing protein | |||
| 5825 | 341 aa hypothetical protein | |||
| 5830 | R | VhaBSW7ORF6735P (98% identity) | VcaBoB90ORF5840P | |
| 5835 | S | S.VleF12I (53% identity) | S.VcaBoB90ORF5840P | |
| 5840 | M | M.VhaE385ORFDP (93% identity) | M2.VcaBoB90ORF5840P | |
| 5845 | M | M1.VspSS3ORF2360P (99% identity) | M1.VcaBoB90ORF5840P | |
| 5850 | diguanylate cyclase | |||
| 6860 | 76 aa hypothetical protein | |||
| 6865 | M | M.Vha520ORF12735P (98% identity) | M.VcaBoB90ORF6865P | |
| 6870 | DNA damage-inducible protein D | |||
| 6875 | S | S.MprAceLIII (75% identity) | S.VcaBoB90ORF6865P | |
| 6880 | R | Cch9127ORFDP (98% identity) | VcaBoB90ORF6865P | |
| 6885 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 545 | aldehyde-activating protein | |||
| 550 | R | Vca283ORFAP (100% identity) | VcaBoB90ORF550P | |
| 555 | phospholipase | |||
| 8680 | cell division protein DamX | |||
| 8685 | M | M.VspG11DamP (100% identity) | GATC | M.VcaBoB90DamP |
| 8690 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1015 | restriction endonuclease subunit R | |||
| 1020 | R | VcaC011MrrP (97% identity) | VcaBoB90MrrP | |
| 1025 | transcriptional regulator | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed 2 | ||||
| 28365 | replication initiation protein | |||
| 28370 | M | M.Vpa0224ORFBP (90% identity) | M.VcaBoB90ORF28370P | |
| 28375 | 86 aa hypothetical protein | |||