Escherichia coli LIM |
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Putative Escherichia coli LIM RM systems
Ref: Chueca,B. et al. unpublished
REBASE ref # 26069
Complete sequence: 4,624,968 bp
GenBank #: CP026027
REBASE acronym: EcoLIM
Org_num: 27303
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | 5-methylcytosine-specific restriction enzyme B | |||
| ??? | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoLIMORFCP |
| ??? | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoLIMORFCP |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | EcoLIMORFCP |
| ??? | methylated adenine and cytosine restriction protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | V | V.Msa17DcmP (100% identity) | V.EcoLIMDcmP | |
| ??? | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoLIMDcmP |
| ??? | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoLIMORFBP |
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLIMDamP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoLIMORFAP |
| ??? | R | Msa17McrC2P (100% identity) | EcoLIMMcrCP | |
| ??? | R | Msa17McrB2P (100% identity) | EcoLIMMcrBP | |
| ??? | restriction endonuclease subunit S | |||
| ??? | type I restriction-modification system deoxyribonuclease | |||
| ??? | R | SenHNK130MrrP (100% identity) | EcoLIMMrrP | |