Propionibacterium freudenreichii JS7a |
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Putative Propionibacterium freudenreichii JS7a RM systems
Ref: Laine,P.K.S. unpublished
REBASE ref # 22611
Complete sequence: 2,700,482 bp
GenBank #: LT618777
REBASE acronym: PfrJS7a
Org_num: 25941
All begin PFR_JS7-2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 248 | DNA protecting protein DprA | |||
| 249 | R | PfrJS8IP (100% identity) | ATCNNNNNGTCG | PfrJS7aIP |
| 250 | S | S.PfrJS8I (100% identity) | ATCNNNNNGTCG | S.PfrJS7aI |
| ??? | M | M.PfrJS8I (100% identity) | ATCNNNNNGTCG | M.PfrJS7aI |
| 253 | zinc-binding sorbitol dehydrogenase | |||
| 658 | 103 aa Hypothetical protein | |||
| ??? | M | M.PfrJS7II (100% identity) | CAGNNNNNNTTG | M.PfrJS7aII |
| ??? | S | S.PfrJS7II (100% identity) | CAGNNNNNNTTG | S.PfrJS7aII |
| 661 | R | PfrJS7IIP (100% identity) | CAGNNNNNNTTG | PfrJS7aIIP |
| 662 | Transposase, ISlxx5 | |||
| 2191 | ABC transporter multidrug efflux pump, fused | |||
| 2192 | M | M.PfrJS7III (100% identity) | CGANNNNNNNTTT | M.PfrJS7aIII |
| ??? | S | S.PfrJS7III (100% identity) | CGANNNNNNNTTT | S.PfrJS7aIII |
| 2194 | R | PfrJS7IIIP (100% identity) | CGANNNNNNNTTT | PfrJS7aIIIP |
| 2195 | DNA polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 551 | 88 aa Hypothetical protein | |||
| ??? | RM | PfrJS7ORF552P (100% identity) | PfrJS7aORF552P | |
| 554 | PF03235 family protein | |||
| 1518 | 428 aa Hypothetical protein | |||
| 1519 | M | M.PfrJS7V (100% identity) | CTGAAG | M.PfrJS7aV |
| 1520 | 247 aa Hypothetical protein | |||
| 2057 | 264 aa Hypothetical protein | |||
| 2058 | V | V.PfrJS7IVP (100% identity) | CCWGG | V.PfrJS7aIVP |
| 2059 | Transposase of ISAar20, ISL3 family | |||
| 2060 | M | M.PfrP12ORFDP (100% identity) | CCWGG | M.PfrJS7aIV |
| 2061 | 67 aa Hypothetical protein | |||
| 2212 | 111 aa Hypothetical protein | |||
| 2213 | R | PfrUF1ORFAP (100% identity) | C | PfrJS7aORF2213P |
| 2214 | IS1096, TnpA protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1931 | Transporter, anaerobic C4-dicarboxylate uptake | |||
| 1932 | R | Pfr513ORF8215P (100% identity) | PfrJS7aORF1932P | |
| 1933 | 99 aa Hypothetical protein | |||