Propionibacterium freudenreichii JS17a |
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Putative Propionibacterium freudenreichii JS17a RM systems
Ref: Laine,P.K.S. unpublished
REBASE ref # 22611
Complete sequence: 2,754,069 bp
GenBank #: LT618790
REBASE acronym: PfrJS17a
Org_num: 20500
All begin PFR_JS17-2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 891 | RNA methyltransferase, TrmH family | |||
| 892 | M | M.PfrTL29I (100% identity) | GAANNNNNNNCTT | M.PfrJS17aI |
| 893 | Restriction system protein mrr | |||
| 894 | S | S.PfrUF1III (100% identity) | GAANNNNNNNCTT | S.PfrJS17aI |
| 895 | R | PfrUF1IIIP (100% identity) | GAANNNNNNNCTT | PfrJS17aIP |
| 896 | 101 aa Hypothetical protein | |||
| 2250 | ABC transporter multidrug efflux pump, fused | |||
| 2251 | M | M.PfrJS17ORF2252P (100% identity) | M.PfrJS17aORF2251P | |
| 2252 | 92 aa Hypothetical protein | |||
| ??? | S | S1.PfrJS17ORF2252P (100% identity) | S1.PfrJS17aORF2251P | |
| ??? | S | S2.PfrJS17ORF2252P (100% identity) | S2.PfrJS17aORF2251P | |
| 2256 | R | PfrUF1ORF10885P (100% identity) | PfrJS17aORF2251P | |
| 2257 | DNA polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2071 | 75 aa Hypothetical protein | |||
| ??? | M | M.PfrJS17ORF2073P (100% identity) | M.PfrJS17aORF2072P | |
| 2074 | 108 aa Hypothetical protein | |||
| 2276 | 111 aa Hypothetical protein | |||
| 2277 | R | PfrUF1ORFAP (100% identity) | C | PfrJS17aORF2277P |
| 2278 | Transposase of ISAar20, ISL3 family | |||
| 2324 | HipA domain protein | |||
| ??? | RM | PfrJS17ORF2325P (100% identity) | PfrJS17aORF2325P | |
| 2326 | 232 aa Hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 271 | Integrase, catalytic region | |||
| 272 | R | PfrJS17IIP (100% identity) | AGCAGY | PfrJS17aIIP |
| 273 | M | M.PfrUF1I (100% identity) | AGCAGY | M.PfrJS17aII |
| 274 | Type I restriction-modification system DNA | |||
| 2326 | 232 aa Hypothetical protein | |||
| 2327 | R | PfrJS17ORF2328P (100% identity) | PfrJS17aORF2328P | |
| 2328 | M | M.PfrJS17ORF2328P (100% identity) | M.PfrJS17aORF2328P | |
| 2329 | 80 aa Hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 892 | Type I restriction-modification system, M | |||
| 893 | R | PfrUF1MrrP (100% identity) | PfrJS17aMrrP | |
| 894 | Type I restriction modification DNA specificity | |||
| 1974 | Transporter, anaerobic C4-dicarboxylate uptake | |||
| ??? | R | PfrJS17ORF1976AP (100% identity) | PfrJS17aORF1975AP | |
| ??? | R | PfrJS17ORF1976BP (100% identity) | PfrJS17aORF1975BP | |
| 1978 | 99 aa Hypothetical protein | |||
| 2010 | pyruvate, phosphate dikinase regulatory | |||
| 2011 | R | PfrJS17Mrr2P (100% identity) | PfrJS17aMrr2P | |
| 2012 | MATE efflux family protein | |||