Escherichia coli ARS-CC6335 |
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Putative Escherichia coli ARS-CC6335 RM systems
Ref: Kim,S.-W. et al. unpublished
REBASE ref # 25612
Contig set: 5,324,136 bp
GenBank #: NFQY00000000 (NZ_NFQY00000000)
REBASE acronym: Eco6335
Org_num: 27189
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 709 | 82 aa hypothetical protein | |||
| 710 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco6335ORFIP |
| 713 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco6335ORFIP |
| 715 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco6335ORFIP |
| 717 | type I restriction-modification system deoxyribonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9 | 116 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco6335ORFGP | |
| 16 | 90 aa hypothetical protein | |||
| 9 | 66 aa hypothetical protein EC990816_1660 | |||
| 10 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco6335ORFFP | |
| 13 | 116 aa hypothetical protein CFI09_14245 | |||
| 13 | 101 aa hypothetical protein WKY_01100 | |||
| 15 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco6335ORFHP | |
| 18 | DNA methylase family protein, partial | |||
| 39 | prophage protein ninB | |||
| 42 | M | M.EcoC3108ORFMP (100% identity) | M.Eco6335ORFEP | |
| 47 | 64 aa hypothetical protein | |||
| 28 | 59 aa hypothetical protein SFxv_3614 | |||
| 29 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco6335ORFCP |
| 30 | tRNA-dihydrouridine synthase B | |||
| 31 | HD domain protein | |||
| 32 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco6335DcmP |
| 34 | V | V.EcoPT54DcmP (100% identity) | V.Eco6335DcmP | |
| 38 | YedA | |||
| 125 | unnamed protein product | |||
| 128 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco6335ORFDP |
| 132 | 108 aa hypothetical protein BXT95_14770 | |||
| 468 | cell division protein DamX | |||
| 471 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco6335DamP |
| 473 | Tryptophan--tRNA ligase | |||
| 837 | 138 aa hypothetical protein | |||
| 838 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco6335ORFAP |
| 846 | DUF1998 domain-containing protein | |||
| 901 | 90 aa hypothetical protein | |||
| 903 | M | M.EcoZ1836ORF24740P (96% identity) | RGGNCCY | M.Eco6335ORFBP |
| 904 | R | EcoS3ORF17765P (100% identity) | RGGNCCY | Eco6335ORFBP |
| 905 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco6335ORFBP |
| 906 | phage integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 720 | 81 aa hypothetical protein Ec53638_1442 | |||
| 721 | R | EcoX21GmrDP (100% identity) | Eco6335GmrDP | |
| 722 | R | Ecos1613GmrSP (100% identity) | Eco6335GmrSP | |
| 723 | 61 aa hypothetical protein | |||