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Putative Escherichia coli ARS-CC5513 RM systems
Ref: Kim,S.-W. et al. unpublished
REBASE ref # 25612
Contig set: 5,285,143 bp
GenBank #: NFRQ00000000 (NZ_NFRQ00000000)
REBASE acronym: Eco5513
Org_num: 27171
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
718 | 82 aa hypothetical protein | |||
719 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco5513ORFGP |
722 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco5513ORFGP |
724 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco5513ORFGP |
726 | type I restriction-modification system deoxyribonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1 | M | M.EcoNE92ORF14960P (100% identity) | M.Eco5513ORFEP | |
4 | 66 aa hypothetical protein EC990816_1660 | |||
19 | prophage protein ninB | |||
22 | M | M.EcoC3108ORFMP (100% identity) | M.Eco5513ORFDP | |
27 | 64 aa hypothetical protein | |||
25 | 59 aa hypothetical protein SFxv_3614 | |||
26 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco5513ORFAP |
27 | tRNA-dihydrouridine synthase B | |||
31 | HD domain protein | |||
32 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco5513DcmP |
34 | V | V.EcoPT54DcmP (100% identity) | V.Eco5513DcmP | |
38 | YedA | |||
75 | DNA methylase family protein, partial | |||
77 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco5513ORFHP | |
80 | 101 aa hypothetical protein WKY_01100 | |||
77 | 120 aa hypothetical protein SAMN04487773_1787 | |||
78 | R | Ecos32ORF15460P (100% identity) | Eco5513ORFCP | |
81 | M | M.Ecos32ORF15460P (100% identity) | M.Eco5513ORFCP | |
84 | 62 aa hypothetical protein | |||
143 | 90 aa hypothetical protein | |||
??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco5513ORFFP | |
150 | 116 aa hypothetical protein | |||
470 | cell division protein DamX | |||
473 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5513DamP |
475 | Tryptophan--tRNA ligase | |||
846 | 138 aa hypothetical protein | |||
847 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco5513ORFBP |
855 | DUF1998 domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
729 | 81 aa hypothetical protein Ec53638_1442 | |||
730 | R | EcoX21GmrDP (100% identity) | Eco5513GmrDP | |
731 | R | Ecos1613GmrSP (100% identity) | Eco5513GmrSP | |
732 | 61 aa hypothetical protein |