Escherichia coli ARS-CC2248 |
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Putative Escherichia coli ARS-CC2248 RM systems
Ref: Kim,S.-W. et al. unpublished
REBASE ref # 25612
Contig set: 5,419,304 bp
GenBank #: NFRT00000000 (NZ_NFRT00000000)
REBASE acronym: Eco2248
Org_num: 27168
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 353 | type I restriction-modification system deoxyribonuclease | |||
| 356 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2248ORFIP |
| 358 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2248ORFIP |
| 360 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2248ORFIP |
| 363 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | M | M.Sso90ORF15820P (94% identity) | M.Eco2248ORFHP | |
| 2 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco2248ORFFP |
| 6 | 349 aa hypothetical protein | |||
| 2 | DNA methylase | |||
| 3 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco2248ORFGP | |
| 5 | 82 aa hypothetical protein UQ35_07645 | |||
| 4 | 116 aa hypothetical protein CFI09_14245 | |||
| 5 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2248ORFEP | |
| 8 | 66 aa hypothetical protein EC990816_1660 | |||
| 77 | DNA methylase family protein, partial | |||
| 79 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2248ORFJP | |
| 82 | 101 aa hypothetical protein WKY_01100 | |||
| 62 | YedA | |||
| 64 | V | V.EcoPT54DcmP (100% identity) | V.Eco2248DcmP | |
| 67 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2248DcmP |
| 69 | HD domain protein | |||
| 107 | Tryptophan--tRNA ligase | |||
| 108 | M | DamMycMip40 fusion protein | GATC | M.Eco2248DamP |
| 111 | cell division protein DamX | |||
| 147 | 89 aa hypothetical protein | |||
| 148 | M | M.Eco7983ORFDP (100% identity) | M.Eco2248ORFDP | |
| 153 | 180 aa hypothetical protein | |||
| 166 | phage integrase | |||
| 167 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2248ORFBP |
| 168 | R | Eco2601ORFCP (100% identity) | RGGNCCY | Eco2248ORFBP |
| 169 | M | M.Eco2601ORFCP (100% identity) | RGGNCCY | M.Eco2248ORFBP |
| 171 | 90 aa hypothetical protein | |||
| 225 | DUF1998 domain-containing protein | |||
| 227 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2248ORFCP |
| 236 | 138 aa hypothetical protein | |||
| 738 | tRNA-dihydrouridine synthase B | |||
| 739 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2248ORFAP |
| 740 | 59 aa hypothetical protein SFxv_3614 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 349 | 61 aa hypothetical protein | |||
| 350 | R | Ecos1613GmrSP (100% identity) | Eco2248GmrSP | |
| 351 | R | EcoX21GmrDP (100% identity) | Eco2248GmrDP | |
| 352 | 81 aa hypothetical protein Ec53638_1442 | |||