Escherichia coli ARS-CC2203 |
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Putative Escherichia coli ARS-CC2203 RM systems
Ref: Kim,S.-W. et al. unpublished
REBASE ref # 25612
Contig set: 5,377,435 bp
GenBank #: NFRX00000000 (NZ_NFRX00000000)
REBASE acronym: Eco2203
Org_num: 27164
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 709 | 82 aa hypothetical protein | |||
| 710 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2203ORFIP |
| 713 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2203ORFIP |
| 715 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2203ORFIP |
| 717 | type I restriction-modification system deoxyribonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | DNA methylase | |||
| 2 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco2203ORFGP | |
| 4 | 82 aa hypothetical protein UQ35_07645 | |||
| 3 | M | M.Eco7094ORFHP (100% identity) | GATC | M.Eco2203ORFHP |
| 7 | unnamed protein product | |||
| 8 | 66 aa hypothetical protein EC990816_1660 | |||
| 9 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2203ORFFP | |
| 12 | 116 aa hypothetical protein CFI09_14245 | |||
| 43 | prophage protein ninB | |||
| 46 | M | M.EcoC3108ORFMP (100% identity) | M.Eco2203ORFEP | |
| 51 | 64 aa hypothetical protein | |||
| 62 | YedA | |||
| 64 | V | V.EcoPT54DcmP (100% identity) | V.Eco2203DcmP | |
| 67 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2203DcmP |
| 69 | HD domain protein | |||
| 83 | DNA methylase family protein, partial | |||
| 85 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2203ORFJP | |
| 88 | 101 aa hypothetical protein WKY_01100 | |||
| 107 | Tryptophan--tRNA ligase | |||
| 108 | M | DamMycMip40 fusion protein | GATC | M.Eco2203DamP |
| 111 | cell division protein DamX | |||
| 147 | 89 aa hypothetical protein | |||
| 148 | M | M.Eco7983ORFDP (100% identity) | M.Eco2203ORFDP | |
| 153 | 180 aa hypothetical protein | |||
| 738 | tRNA-dihydrouridine synthase B | |||
| 739 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2203ORFAP |
| 740 | 59 aa hypothetical protein SFxv_3614 | |||
| 837 | 138 aa hypothetical protein | |||
| 838 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2203ORFBP |
| 846 | DUF1998 domain-containing protein | |||
| 901 | 90 aa hypothetical protein | |||
| 903 | M | M.Eco2601ORFCP (100% identity) | RGGNCCY | M.Eco2203ORFCP |
| 904 | R | Eco2601ORFCP (100% identity) | RGGNCCY | Eco2203ORFCP |
| 905 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2203ORFCP |
| 906 | phage integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 720 | 81 aa hypothetical protein Ec53638_1442 | |||
| 721 | R | EcoX21GmrDP (100% identity) | Eco2203GmrDP | |
| 722 | R | Ecos1613GmrSP (100% identity) | Eco2203GmrSP | |
| 723 | 61 aa hypothetical protein | |||