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Putative Escherichia coli ARS-CC2601 RM systems
Ref: Kim,S.-W. et al. unpublished
REBASE ref # 25612
Contig set: 5,375,287 bp
GenBank #: NFRY00000000 (NZ_NFRY00000000)
REBASE acronym: Eco2601
Org_num: 27163
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
709 | 82 aa hypothetical protein | |||
710 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2601ORFIP |
713 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2601ORFIP |
715 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2601ORFIP |
717 | type I restriction-modification system deoxyribonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1 | DNA methylase | |||
2 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco2601ORFGP | |
4 | 78 aa hypothetical protein UQ35_07645 | |||
3 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2601ORFHP |
6 | unnamed protein product | |||
8 | 66 aa hypothetical protein EC990816_1660 | |||
9 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2601ORFFP | |
12 | 116 aa hypothetical protein CFI09_14245 | |||
13 | 101 aa hypothetical protein WKY_01100 | |||
15 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2601ORFJP | |
18 | DNA methylase family protein, partial | |||
43 | prophage protein ninB | |||
46 | M | M.EcoC3108ORFMP (100% identity) | M.Eco2601ORFEP | |
51 | 64 aa hypothetical protein | |||
62 | YedA | |||
64 | V | V.EcoPT54DcmP (100% identity) | V.Eco2601DcmP | |
67 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2601DcmP |
69 | HD domain protein | |||
147 | 89 aa hypothetical protein | |||
148 | M | M.Eco7983ORFDP (100% identity) | M.Eco2601ORFDP | |
153 | 180 aa hypothetical protein | |||
467 | cell division protein DamX | |||
470 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2601DamP |
472 | Tryptophan--tRNA ligase | |||
738 | tRNA-dihydrouridine synthase B | |||
739 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2601ORFAP |
740 | 59 aa hypothetical protein SFxv_3614 | |||
837 | 138 aa hypothetical protein | |||
838 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2601ORFBP |
846 | DUF1998 domain-containing protein | |||
901 | 90 aa hypothetical protein | |||
903 | M | M.Eco2248ORFBP (100% identity) | RGGNCCY | M.Eco2601ORFCP |
904 | R | Eco2248ORFBP (100% identity) | RGGNCCY | Eco2601ORFCP |
905 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2601ORFCP |
906 | phage integrase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
720 | 81 aa hypothetical protein Ec53638_1442 | |||
721 | R | EcoX21GmrDP (100% identity) | Eco2601GmrDP | |
722 | R | Ecos1613GmrSP (100% identity) | Eco2601GmrSP | |
723 | 61 aa hypothetical protein |