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Putative Porphyromonas gingivalis W83 RM systems
Ref: Acuna-Amador,L. et al. BMC Genomics 19 (1), 54 (2018)
REBASE ref # 25995
Complete sequence: 2,343,999 bp
GenBank #: CP025932
REBASE acronym: PgiW83
Org_num: 27203
All begin CF003_, CF003_n, CF003_t
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
541 | 95 aa hypothetical protein | |||
??? | C | C.Pin2866ORF2135P (100% identity) | C.PgiW83ORF544P | |
544 | M | M.Pin2866ORF2135P (100% identity) | M.PgiW83ORF544P | |
545 | S | S.PgiTORF544P (98% identity) | S.PgiW83ORF544P | |
547 | ATPase component of energizing module of biotin | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
864 | invertase | |||
??? | RM | RM2.PgiW50ORF3930P (100% identity) | PgiW83ORFAP | |
862 | type IIS restriction endonuclease | |||
??? | type IIS restriction endonuclease | |||
862 | RM | RM1.PgiW50ORF3930P (100% identity) | PgiW83ORF862P | |
861 | ATP-dependent helicase | |||
30 | 215 aa hypothetical protein | |||
1469 | RM | PgiW50ORF6620P (100% identity) | PgiW83ORF1469P | |
1470 | 76 aa hypothetical protein | |||
1694 | aminodeoxychorismate lyase | |||
1696 | RM | Pin2903ORF8480AP (100% identity) | PgiW83ORF1696AP | |
1697 | RM | PgiW50ORF7670P (100% identity) | PgiW83ORF1696BP | |
1701 | Zn-dependent dipeptidase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
973 | alpha-12-mannosidase | |||
972 | R | PgiW50McrCP (100% identity) | PgiW83McrCP | |
971 | R | PgiW50McrBP (100% identity) | PgiW83McrBP | |
970 | transposase in ISPg4 | |||
22 | pseudogene | |||
968 | R | PgiW50MrrP (100% identity) | PgiW83MrrP | |
965 | phosphatidylserine decarboxylase proenzyme |