Escherichia coli ECA-B |
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Putative Escherichia coli ECA-B RM systems
Ref: Thacker,T.C. et al. unpublished
REBASE ref # 25593
Contig set: 5,347,407 bp
GenBank #: NHTF00000000 (NZ_NHTF00000000)
REBASE acronym: EcoBA3
Org_num: 27130
All begin CCS08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9530 | ISL3 family transposase | |||
| 9535 | R | EcoSC054ORF4470P (99% identity) | EcoBA3ORF9540P | |
| 9540 | M | M.EcosC41ORF22705P (100% identity) | M.EcoBA3ORF9540P | |
| ??? | S | S.EcosC41ORF22705P (100% identity) | S.EcoBA3ORF9540P | |
| 9550 | 540 aa hypothetical protein | |||
| 500 | 185 aa hypothetical protein | |||
| 505 | R | Eco3133IP (100% identity) | ACYNNNNNNGTTC | EcoBA3ORF515P |
| 510 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoBA3ORF515P |
| 515 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoBA3ORF515P |
| 520 | addiction module antitoxin | |||
| 15600 | 113 aa hypothetical protein | |||
| 15605 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.EcoBA3ORF15610P |
| 15610 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoBA3ORF15610P |
| 15615 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoBA3ORF15610P |
| 15620 | restriction endonuclease | |||
| 13235 | 380 aa hypothetical protein | |||
| 13240 | M | M.EcoSTEC346ORFGP (100% identity) | M.EcoBA3ORF13240P | |
| 13245 | S | S.EcoTX1999ORF2159P (100% identity) | S.EcoBA3ORF13240P | |
| 13250 | R | EcoTX1999ORF2159P (100% identity) | EcoBA3ORF13240P | |
| 13255 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15270 | 64 aa hypothetical protein | |||
| 15275 | M | M.EcosE1ORFAP (100% identity) | M.EcoBA3ORF15275P | |
| 15280 | TrmB family transcriptional regulator | |||
| 10080 | transporter | |||
| 10085 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoBA3ORF10085P |
| 10090 | Fis family transcriptional regulator | |||
| 20280 | ribulose-phosphate 3-epimerase | |||
| 20285 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoBA3DamP |
| 20290 | protein DamX | |||
| 12900 | hydrolase | |||
| 12905 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoBA3DcmP |
| 12910 | V | V.SflSTLE3DcmP (100% identity) | V.EcoBA3DcmP | |
| 12915 | drug/metabolite exporter YedA | |||
| 19285 | 146 aa hypothetical protein | |||
| 19290 | M | M.EcoNT1F31ORF16740P (99% identity) | GATC | M.EcoBA3ORF19290P |
| 19295 | NinE family protein | |||
| 23815 | LexA family transcriptional regulator | |||
| 23820 | M | M.SflN101ORF11410P (100% identity) | GATC | M.EcoBA3ORF23820P |
| 23825 | 164 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15590 | R | Ssp28760McrCP (100% identity) | EcoBA3McrCP | |
| 15595 | R | Ssp28760McrBP (100% identity) | EcoBA3McrBP | |
| 15600 | 113 aa hypothetical protein | |||
| 15615 | type I restriction-modification system | |||
| 15620 | R | Ssp28760MrrP (100% identity) | EcoBA3MrrP | |
| 15625 | GTPase | |||