Phaeobacter inhibens P88 |
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Putative Phaeobacter inhibens P88 RM systems
Ref: Freese,H.M. et al. Front Microbiol 8, 1659 (2017)
REBASE ref # 25228
| Sequence length: | GenBank #: | |
| Chromosome: | 3,860,429 bp | CP010725 |
| plasmid pP88_e: | 82,130 bp | CP010730 |
| plasmid pP88_h: | 41,384 bp | CP010733 |
REBASE acronym: PinP88
Org_num: 27142
All begin PhaeoP88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3465 | metal-dependent hydrolase | |||
| 3466 | R | PpiS26ORF3330P (86% identity) | TCCACNNNNNCTRC | PinP88IIP |
| 3467 | S | S.Mme11130ORF3660P (42% identity) | TCCACNNNNNCTRC | S.PinP88II |
| 3468 | M | M.PpiS26ORF3330P (92% identity) | TCCACNNNNNCTRC | M.PinP88II |
| 3469 | helix-turn-helix protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 982 | aminotransferase class-III | |||
| 985 | R | PinT5ORFAP (99% identity) | PinP88ORF986P | |
| 986 | M | M.PinT5ORFAP (100% identity) | M.PinP88ORF986P | |
| 988 | 68 aa hypothetical protein | |||
| 2055 | 123 aa hypothetical protein | |||
| 2056 | M | M.PinM6256ORF13210P (77% identity) | M.PinP88ORF2056P | |
| 2057 | 156 aa hypothetical protein | |||
| 2575 | 134 aa hypothetical protein | |||
| 2576 | RM | Rmu17069ORF4182P (73% identity) | PinP88ORF2576P | |
| 2577 | 204 aa hypothetical protein | |||
| 3439 | adenylate and guanylate cyclase | |||
| 3440 | M | M.PinT5I (100% identity) | GANTC | M.PinP88I |
| 3441 | ribonuclease HII | |||
| plasmid pP88_e | ||||
| 4507 | transcriptional regulator | |||
| 4508 | RM | PpiP13II (100% identity) | CGCRGAC | PinP88III |
| 4509 | DNA mismatch repair enzyme (predicted ATPase) | |||
| plasmid pP88_h | ||||
| 4645 | Antitoxin HicB | |||
| 4646 | M | M.PinP18ORF4117P (100% identity) | M.PinP88ORF4646P | |
| 4647 | 80 aa hypothetical protein | |||