Vibrio tapetis subsp. tapetis |
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Putative Vibrio tapetis subsp. tapetis RM systems
Ref: Pichereau,V. unpublished
REBASE ref # 25564
| Sequence length: | GenBank #: | |
| chromosome A: | 3,788,452 bp | LT960611 |
| chromosome B: | 1,855,153 bp | LT960612 |
| plasmid P: | 82,266 bp | LT960613 |
REBASE acronym: Vta4600
Org_num: 27024
All begin VTAP4600_A, VTAP4600_B, VTAP4600_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome A | ||||
| 1942 | conserved protein of unknown function | |||
| 1943 | S | S.Vfl8658ORFBP (63% identity) | S.Vta4600ORF1944P | |
| 1944 | M | M.Vch14107ORFAP (95% identity) | M.Vta4600ORF1944P | |
| 1945 | conserved protein of unknown function | |||
| 1946 | conserved protein of unknown function | |||
| 1947 | conserved protein of unknown function | |||
| 1948 | R | Van286ORF8785P (90% identity) | Vta4600ORF1944P | |
| 1949 | GGDEF domain-containing protein | |||
| 2436 | conserved protein of unknown function | |||
| 2437 | R | VcaLB102ORF20660P (77% identity) | Vta4600ORF2441P | |
| 2438 | conserved protein of unknown function | |||
| 2439 | conserved protein of unknown function | |||
| 2440 | S | S.Vga7244ORFCP (50% identity) | S.Vta4600ORF2441P | |
| ??? | M | M.VcyED008ORF10280P (89% identity) | M.Vta4600ORF2441P | |
| 2443 | conserved protein of unknown function | |||
| 2577 | Transcriptional regulator, putative (fragment) | |||
| 2578 | M | M.VhaBSW7ORF675P (88% identity) | M.Vta4600ORF2578P | |
| 2579 | S | S.Psa8338ORF2972P (45% identity) | S.Vta4600ORF2578P | |
| 2580 | R | VhaBSW7ORF675P (90% identity) | Vta4600ORF2578P | |
| 2581 | Thymidylate synthase | |||
| 3171 | conserved membrane protein of unknown function | |||
| 3172 | R | Type I deoxyribonuclease HsdR (fragment) | Vta4600ORF3177BP | |
| 3173 | transposase | |||
| 3174 | protein of unknown function | |||
| 3175 | R | VleF12IP (76% identity) | Vta4600ORF3177AP | |
| 3176 | S | S.VcrED395ORF13460P (94% identity) | S.Vta4600ORF3177P | |
| 3177 | M | M2.VcrED395ORF13460P (95% identity) | M.Vta4600ORF3177P | |
| 3178 | Site-specific DNA-methyltransferase | |||
| 3177 | Type I site-specific deoxyribonuclease | |||
| 3178 | M | M.VleF12ORFBP (98% identity) | M.Vta4600ORF3178P | |
| 3179 | FOG: GGDEF domain protein | |||
| 3494 | conserved protein of unknown function | |||
| 3495 | M | M.VtaORF26P (100% identity) | M.Vta4600ORF3495P | |
| 3496 | S | S.VtaORF26P (100% identity) | S.Vta4600ORF3495P | |
| 3497 | R | VtaORF26P (100% identity) | Vta4600ORF3495P | |
| 3498 | bacteriophage abortive infection | |||
| plasmid P | ||||
| 55 | conserved protein of unknown function | |||
| 56 | M | M.VtaORF26P (100% identity) | M.Vta4600ORF56P | |
| 57 | S | S.VtaORF26P (100% identity) | S.Vta4600ORF56P | |
| 58 | R | VtaORF26P (100% identity) | Vta4600ORF56P | |
| 59 | bacteriophage abortive infection | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome A | ||||
| 2573 | protein of unknown function | |||
| 2574 | M | M.PhaMELD1ORF1500P (76% identity) | M.Vta4600ORF2574P | |
| 2575 | FOG: GGDEF domain protein | |||
| 2960 | D-ribulose-5-phosphate 3-epimerase | |||
| 2961 | M | M.Vco27227DamP (88% identity) | M.Vta4600DamP | |
| 2962 | conserved protein of unknown function | |||
| 3621 | Resolvease/recombinase | |||
| 3622 | M | M.VpaCHN25ORF25P (99% identity) | M.Vta4600ORF3622P | |
| 3623 | R | VpaCHN25ORF25P (99% identity) | Vta4600ORF3622P | |
| 3624 | conserved protein of unknown function | |||
| chromosome B | ||||
| 61 | transposase | |||
| 62 | M | M.VspSED10ORF7590P (93% identity) | M.Vta4600ORF62P | |
| 63 | conserved protein of unknown function | |||