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Putative Paracoccus species CBA4604 RM systems
Ref: Roh,S.W. et al. unpublished
REBASE ref # 25554
Complete sequence: 3,121,136 bp
GenBank #: CP025583
REBASE acronym: Psp4604
Org_num: 26999
All begin CYR75_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4040 | 383 aa hypothetical protein | |||
4045 | S | S.Pko0001ORF8370P (94% identity) | GAGNNNNNNGCTG | S.Psp4604II |
4050 | M | M.RbaLa6ORF6077P (96% identity) | GAGNNNNNNGCTG | M.Psp4604II |
4055 | R | Pst25392ORF6880P (99% identity) | GAGNNNNNNGCTG | Psp4604IIP |
4060 | 131 aa hypothetical protein | |||
4655 | amidohydrolase | |||
4660 | M | M.AspCSR2ORFAP (91% identity) | TGAANNNNNTGG | M.Psp4604III |
4665 | S | S.Pye32053ORF4698P (46% identity) | TGAANNNNNTGG | S.Psp4604III |
4670 | 379 aa hypothetical protein | |||
4675 | R | AspCSR2ORFAP (83% identity) | TGAANNNNNTGG | Psp4604IIIP |
4680 | 231 aa hypothetical protein | |||
6085 | IS110 family transposase | |||
6090 | R | Rin26383ORF1902P (90% identity) | Psp4604ORF6105P | |
6095 | S | S.Ano17248ORF14435P (27% identity) | S.Psp4604ORF6105P | |
6100 | DUF4357 domain-containing protein | |||
6105 | M | M.Rin26383ORF1902P (89% identity) | M.Psp4604ORF6105P | |
6110 | transcriptional regulator | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
400 | 60 aa hypothetical protein | |||
405 | M | M1.PspD09ORF14660P (80% identity) | M.Psp4604ORF405P | |
410 | DNA methylase | |||
405 | DNA cytosine methyltransferase | |||
410 | M | M.PcoRK1ORF2590P (78% identity) | M.Psp4604ORF410P | |
415 | RNA polymerase subunit sigma | |||
455 | 249 aa hypothetical protein | |||
460 | V | V.Rsp17029ORF3387P (79% identity) | V.Psp4604ORF470P | |
465 | R | Rsp17029ORF3387P (92% identity) | Psp4604ORF470P | |
470 | M | M.Rsp17029ORF3387P (91% identity) | M.Psp4604ORF470P | |
475 | 142 aa hypothetical protein | |||
4140 | RNA polymerase subunit sigma | |||
4145 | M | M2.Szo19623ORF16935P (95% identity) | M.Psp4604ORF4145P | |
4150 | 74 aa hypothetical protein | |||
4490 | 142 aa hypothetical protein | |||
4495 | M | M.Hdu456ORF14345P (97% identity) | M.Psp4604ORF4495P | |
4500 | 70 aa hypothetical protein | |||
4625 | 83 aa hypothetical protein | |||
4630 | V | V.CbaLH4ORF6040P (89% identity) | V.Psp4604ORF4635P | |
4635 | M | M.Psp64ORFBP (92% identity) | M.Psp4604ORF4635P | |
4640 | 333 aa hypothetical protein | |||
9985 | ribonuclease HII | |||
9990 | M | M.Psp80058ORF13760P (93% identity) | GANTC | M.Psp4604I |
9995 | alkane 1-monooxygenase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
800 | CHRD domain-containing protein | |||
805 | R | RsaMcrCP (94% identity) | Psp4604McrCP | |
??? | R | SspJK71McrBP (39% identity) | Psp4604McrBP | |
815 | cell filamentation protein Fic |