Salmonella enterica subsp. enterica serovar Muenster 420 CFSAN001301 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Muenster 420 CFSAN001301 RM systems
Ref: Timme,R.E. et al. Genome Biol Evol 5 (11), 2109-2123 (2013)
REBASE ref # 17417
Complete sequence: 4,756,014 bp
GenBank #: CP019201
REBASE acronym: Sen420
Org_num: 26992
All begin SEEM0420_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20595 | molecular chaperone Tir | |||
| 20600 | M | M.SenS708ORF17810P (100% identity) | TAAGNNNNNTTC | M.Sen420II |
| 20605 | S | S.SenS708ORF17810P (100% identity) | TAAGNNNNNTTC | S.Sen420II |
| 20610 | R | SenS708ORF17810P (100% identity) | TAAGNNNNNTTC | Sen420IIP |
| 20615 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1905 | cell division protein DamX | |||
| 1910 | M | M.StyTDamP (100% identity) | GATC | M.Sen420DamP |
| 1915 | ribulose-phosphate 3-epimerase | |||
| 2420 | DUF2556 domain-containing protein | |||
| 2425 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen420III |
| 2430 | Fis family transcriptional regulator | |||
| 9670 | phosphohydrolase | |||
| 9675 | M | M.SenS688DcmP (100% identity) | CCWGG | M.Sen420DcmP |
| 9680 | V | V.StyUK1DcmP (100% identity) | V.Sen420DcmP | |
| 9685 | drug/metabolite exporter YedA | |||
| 14865 | 112 aa hypothetical protein | |||
| ??? | M | M.Sen1929ORF15355P (100% identity) | M.Sen420ORFAP | |
| 14880 | 82 aa hypothetical protein | |||
| 20460 | 77 aa hypothetical protein | |||
| 20465 | R | SenS708ORF17695P (100% identity) | Sen420ORF20470P | |
| 20470 | M | M.SenRM074ORF19685P (100% identity) | M.Sen420ORF20470P | |
| 20475 | DNA helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18120 | cytochrome ubiquinol oxidase subunit I | |||
| ??? | R | Sens30601ORF17060P (100% identity) | CAGAG | Sen420IP |
| 18130 | M | M.SenRM074ORF17420P (100% identity) | CAGAG | M.Sen420I |
| 18135 | MFS transporter | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6025 | 75 aa hypothetical protein | |||
| 6030 | M | M.StyLTORF13745P (100% identity) | GATC | M.Sen420ORF6030P |
| 6035 | replication endonuclease from prophage-like | |||