Escherichia coli SMN013SH2 |
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Putative Escherichia coli SMN013SH2 RM systems
Ref: Duan,M. et al. unpublished
REBASE ref # 26605
| Sequence length: | GenBank #: | |
| Chromosome: | 5,143,533 bp | CP023673 |
| plasmid pO177A2: | 87,524 bp | CP023674 |
REBASE acronym: Eco13SH2
Org_num: 26990
All begin CP957_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23800 | restriction endonuclease | |||
| 23805 | M | M.EcoSH3ORF25175P (100% identity) | M.Eco13SH2ORF23805P | |
| 23810 | S | S.EcoSH3ORF25175P (100% identity) | S.Eco13SH2ORF23805P | |
| 23815 | R | EcoSH3ORF25175P (100% identity) | Eco13SH2ORF23805P | |
| 23820 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2010 | protein DamX | |||
| 2015 | M | M.SsoST152DamP (100% identity) | GATC | M.Eco13SH2DamP |
| 2020 | ribulose-phosphate 3-epimerase | |||
| 2610 | DUF2556 domain-containing protein | |||
| 2615 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco13SH2ORF2615P |
| 2620 | Fis family transcriptional regulator | |||
| 7315 | recombination protein NinB | |||
| 7320 | M | M.EcoSH3ORF8760P (100% identity) | GATC | M.Eco13SH2ORF7320P |
| 7325 | NinE family protein | |||
| 8950 | recombination protein NinB | |||
| 8955 | M | M.EcoSH3ORF10400P (100% identity) | GATC | M.Eco13SH2ORF8955P |
| 8960 | NinE family protein | |||
| 10125 | protein ninB | |||
| 10130 | M | M.Eph2012ORF32P (98% identity) | GATC | M.Eco13SH2ORF10130P |
| 10135 | NinE family protein | |||
| 11030 | phosphohydrolase | |||
| 11035 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco13SH2DcmP |
| 11040 | V | V.SflFF64DcmP (100% identity) | V.Eco13SH2DcmP | |
| 11045 | drug/metabolite exporter YedA | |||
| 13200 | TrmB family transcriptional regulator | |||
| 13205 | M | M.EcoSH3ORF14620P (100% identity) | M.Eco13SH2ORF13205P | |
| 13215 | tellurite resistance protein | |||
| 15880 | 74 aa hypothetical protein | |||
| 15900 | M | M.EcoDEC9AORF2493P (100% identity) | M.Eco13SH2ORF15900P | |
| 15905 | TrmB family transcriptional regulator | |||
| 18560 | resolvase | |||
| 18565 | M | M.Esp911AORF970P (100% identity) | GGTNACC | M.Eco13SH2ORF18565P |
| 18570 | R | Esp911AORF970P (100% identity) | GGTNACC | Eco13SH2ORF18565P |
| 18575 | transpeptidase | |||
| 18895 | DUF1317 domain-containing protein | |||
| 18900 | M | M.Sbo812ORFAP (100% identity) | M.Eco13SH2ORF18900P | |
| 18905 | cell division protein ZapA | |||
| 23570 | LexA family transcriptional repressor | |||
| 23575 | M | M.EcoSH3ORF25410P (100% identity) | CTGCAG | M.Eco13SH2ORF23575P |
| 23580 | R | Sso1099IP (100% identity) | CTGCAG | Eco13SH2ORF23575P |
| 23585 | 299 aa hypothetical protein | |||
| 25785 | tellurite resistance protein | |||
| 25800 | M | M.EcoSH3ORF27515P (100% identity) | M.Eco13SH2ORF25800P | |
| 25805 | 67 aa hypothetical protein | |||
| 25830 | RusA family crossover junction | |||
| 25835 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.Eco13SH2ORF25835P |
| 25840 | helix-turn-helix domain-containing protein | |||
| plasmid pO177A2 | ||||
| 27925 | 101 aa hypothetical protein | |||
| 27930 | M | M.SflN92ORF24820P (100% identity) | M.Eco13SH2ORF27930P | |
| 27935 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 290 | 199 aa hypothetical protein | |||
| ??? | M | M.EcoSO178ORF20185P (100% identity) | GTCTC | M.Eco13SH2ORF295P |
| ??? | R | Ecow264ORF380P (100% identity) | GTCTC | Eco13SH2ORF295P |
| 305 | 0 aa hypothetical protein | |||