Escherichia coli SMN152SH1 |
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Putative Escherichia coli SMN152SH1 RM systems
Ref: Duan,M. et al. unpublished
REBASE ref # 26605
| Sequence length: | GenBank #: | |
| Chromosome: | 5,302,502 bp | CP024618 |
| plasmid pO177A1: | 88,896 bp | CP024617 |
REBASE acronym: EcoSH1
Org_num: 26970
All begin CR916_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3065 | IS1 family transposase | |||
| 3070 | R | EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | EcoSH1IP |
| 3075 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.EcoSH1I |
| 3080 | M | M.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | M.EcoSH1I |
| 3085 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 950 | helix-turn-helix domain-containing protein | |||
| 955 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.EcoSH1ORF955P |
| 960 | RusA family crossover junction | |||
| 985 | 67 aa hypothetical protein | |||
| 990 | M | M.EcoSH3ORF27515P (100% identity) | M.EcoSH1ORF990P | |
| 1005 | tellurite resistance protein | |||
| 3300 | 299 aa hypothetical protein | |||
| 3305 | R | Sso1099IP (100% identity) | CTGCAG | EcoSH1IIIP |
| 3310 | M | M.EcoSH3ORF25410P (100% identity) | CTGCAG | M.EcoSH1III |
| 3315 | LexA family transcriptional repressor | |||
| 7560 | cell division protein ZapA | |||
| 7565 | M | M.Sbo812ORFAP (100% identity) | M.EcoSH1ORF7565P | |
| 7570 | DUF1317 domain-containing protein | |||
| 10810 | TrmB family transcriptional regulator | |||
| 10815 | M | M.EcoSH3ORF17675P (100% identity) | M.EcoSH1ORF10815P | |
| 10835 | 74 aa hypothetical protein | |||
| 13885 | tellurite resistance protein | |||
| 13895 | M | M.EcoSH3ORF14620P (100% identity) | M.EcoSH1ORF13895P | |
| 13900 | TrmB family transcriptional regulator | |||
| 14110 | sialate O-acetylesterase | |||
| 14115 | M | M.EcoTWORF1742P (100% identity) | M.EcoSH1ORF14115P | |
| 14120 | TrmB family transcriptional regulator | |||
| 16605 | drug/metabolite exporter YedA | |||
| 16610 | V | V.SflFF64DcmP (100% identity) | V.EcoSH1DcmP | |
| 16615 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoSH1DcmP |
| 16620 | phosphohydrolase | |||
| 18340 | NinE family protein | |||
| 18345 | M | M.EcoSH3ORF10400P (100% identity) | GATC | M.EcoSH1ORF18345P |
| 18350 | recombination protein NinB | |||
| 19990 | NinE family protein | |||
| 19995 | M | M.EcoSH3ORF8760P (100% identity) | GATC | M.EcoSH1ORF19995P |
| 20000 | recombination protein NinB | |||
| 20150 | regulator | |||
| 20155 | M | M.EspP079ORF2847P (100% identity) | GATC | M.EcoSH1ORF20155P |
| 20160 | 70 aa hypothetical protein | |||
| 20320 | NinE family protein | |||
| ??? | M | M.Eco73ORFAP (91% identity) | M.EcoSH1ORFAP | |
| 20330 | recombination protein NinB | |||
| 21870 | replication endonuclease | |||
| 21875 | M | M.EcoSH3ORF6875P (100% identity) | GATC | M.EcoSH1ORF21875P |
| 21880 | DUF3850 domain-containing protein | |||
| 25265 | Fis family transcriptional regulator | |||
| 25270 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSH1ORF25270P |
| 25275 | DUF2556 domain-containing protein | |||
| 25855 | ribulose-phosphate 3-epimerase | |||
| 25860 | M | M.SsoST152DamP (100% identity) | GATC | M.EcoSH1DamP |
| 25865 | protein DamX | |||
| plasmid pO177A1 | ||||
| 800 | 101 aa hypothetical protein | |||
| 805 | M | M.SflN92ORF24820P (100% identity) | M.EcoSH1ORF805P | |
| 810 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27580 | 0 aa hypothetical protein | |||
| ??? | R | Ecow264ORF380P (100% identity) | GTCTC | EcoSH1IIP |
| ??? | M | M.EcoSO178ORF20185P (100% identity) | GTCTC | M.EcoSH1II |
| 27595 | 199 aa hypothetical protein | |||