Escherichia coli SMN197SH3 |
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Putative Escherichia coli SMN197SH3 RM systems
Ref: Duan,M. et al. unpublished
REBASE ref # 26605
| Sequence length: | GenBank #: | |
| Chromosome: | 5,267,207 bp | CP024056 |
| plasmid pO177A3: | 88,839 bp | CP024055 |
REBASE acronym: EcoSH3
Org_num: 26977
All begin CRT55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25160 | IS1 family transposase | |||
| 25165 | R | EcoSH1IP (100% identity) | EcoSH3ORF25175P | |
| 25170 | S | S.EcoSH1I (100% identity) | S.EcoSH3ORF25175P | |
| 25175 | M | M.EcoSH1I (100% identity) | M.EcoSH3ORF25175P | |
| 25180 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2875 | protein DamX | |||
| 2880 | M | M.SsoST152DamP (100% identity) | GATC | M.EcoSH3DamP |
| 2885 | ribulose-phosphate 3-epimerase | |||
| 3475 | DUF2556 domain-containing protein | |||
| 3480 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSH3ORF3480P |
| 3485 | Fis family transcriptional regulator | |||
| 6870 | DUF3850 domain-containing protein | |||
| 6875 | M | M.EcoSH1ORF21875P (100% identity) | GATC | M.EcoSH3ORF6875P |
| 6880 | replication endonuclease | |||
| 8430 | recombination protein NinB | |||
| 8435 | M | M.EcoSH1ORF19995P (100% identity) | GATC | M.EcoSH3ORF8760P |
| 8440 | NinE family protein | |||
| 8595 | 70 aa hypothetical protein | |||
| 8600 | M | M.EspP079ORF2847P (100% identity) | GATC | M.EcoSH3ORF8600P |
| 8605 | regulator | |||
| 10395 | recombination protein NinB | |||
| 10400 | M | M.EcoSH1ORF18345P (100% identity) | GATC | M.EcoSH3ORF10400P |
| 10405 | NinE family protein | |||
| 12135 | phosphohydrolase | |||
| 12140 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoSH3DcmP |
| 12145 | V | V.SflFF64DcmP (100% identity) | V.EcoSH3DcmP | |
| 12150 | drug/metabolite exporter YedA | |||
| 14395 | TrmB family transcriptional regulator | |||
| 14400 | M | M.EcoTWORF1742P (100% identity) | M.EcoSH3ORF14400P | |
| 14405 | sialate O-acetylesterase | |||
| 14615 | TrmB family transcriptional regulator | |||
| 14620 | M | M.EcoSH1ORF13895P (100% identity) | M.EcoSH3ORF14620P | |
| 14630 | tellurite resistance protein | |||
| 17655 | 74 aa hypothetical protein | |||
| 17675 | M | M.EcoSH1ORF10815P (100% identity) | M.EcoSH3ORF17675P | |
| 17680 | TrmB family transcriptional regulator | |||
| 20935 | DUF1317 domain-containing protein | |||
| 20940 | M | M.Sbo812ORFAP (100% identity) | M.EcoSH3ORF20940P | |
| 20945 | cell division protein ZapA | |||
| 25400 | 299 aa hypothetical protein | |||
| 25405 | R | Sso1099IP (100% identity) | CTGCAG | EcoSH3ORF25410P |
| 25410 | M | M.EcoSH1III (100% identity) | CTGCAG | M.EcoSH3ORF25410P |
| 25415 | LexA family transcriptional repressor | |||
| 27500 | tellurite resistance protein | |||
| 27515 | M | M.EcoSH1ORF990P (100% identity) | M.EcoSH3ORF27515P | |
| 27520 | 67 aa hypothetical protein | |||
| 27545 | RusA family crossover junction | |||
| 27550 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.EcoSH3ORF27550P |
| 27555 | helix-turn-helix domain-containing protein | |||
| plasmid pO177A3 | ||||
| 630 | 73 aa hypothetical protein | |||
| 635 | M | M.SflN92ORF24820P (100% identity) | M.EcoSH3ORF635P | |
| 640 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1145 | 199 aa hypothetical protein | |||
| ??? | M | M.EcoSO178ORF20185P (100% identity) | GTCTC | M.EcoSH3ORF1150P |
| ??? | R | Ecow264ORF380P (100% identity) | GTCTC | EcoSH3ORF1150P |
| 1160 | 0 aa hypothetical protein | |||