Pseudanabaena species ABRG5-3 |
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Putative Pseudanabaena species ABRG5-3 RM systems
Ref: Tajima,N. et al. unpublished
REBASE ref # 26584
| Sequence length: | GenBank #: | |
| Chromosome: | 4,796,642 bp | AP017560 |
| plasmid ABRG53a: | 214,764 bp | AP017561 |
REBASE acronym: PspRG53
Org_num: 26753
All begin ABRG53_, ABRG53_a
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1309 | 87 aa hypothetical protein | |||
| 1310 | M | M.Lco141951ORF24260P (82% identity) | M.PspRG53ORF1310P | |
| 1311 | 266 aa hypothetical protein | |||
| 1312 | 173 aa hypothetical protein | |||
| 1313 | 205 aa hypothetical protein | |||
| 1314 | 152 aa hypothetical protein | |||
| 1315 | 79 aa hypothetical protein | |||
| 1316 | predicted nucleic acid-binding protein | |||
| 1317 | S | S.Pab2014ORF929P (30% identity) | S.PspRG53ORF1310P | |
| 1318 | R | Lco141951ORF24260P (72% identity) | PspRG53ORF1310P | |
| 1319 | metal-dependent hydrolase | |||
| 1358 | virulence-associated E | |||
| 1359 | R | Mre10914ORFMP (70% identity) | PspRG53ORF1362P | |
| 1360 | 269 aa hypothetical protein | |||
| 1361 | S | S.Ncf36ORF7080P (53% identity) | S.PspRG53ORF1362P | |
| 1362 | M | M.Ncf36ORF7080P (78% identity) | M.PspRG53ORF1362P | |
| 1363 | 350 aa hypothetical protein | |||
| 2318 | 180 aa hypothetical protein | |||
| 2319 | M | M.LspHIORF13685P (65% identity) | M.PspRG53ORF2319P | |
| 2320 | fdxN element excision controlling factor | |||
| 2321 | fdxN element excision controlling factor | |||
| 2322 | 75 aa hypothetical protein | |||
| 2323 | PilT domain-containing protein | |||
| 2324 | 98 aa hypothetical protein | |||
| 2325 | 145 aa hypothetical protein | |||
| 2326 | ribbon-helix-helix protein, copG family | |||
| 2327 | death-on-curing family protein | |||
| 2328 | S | S.Mae44ORF1459P (42% identity) | S.PspRG53ORF2319P | |
| 2329 | 152 aa hypothetical protein | |||
| 2330 | 198 aa hypothetical protein | |||
| 2331 | R | Dac2973ORF1007P (67% identity) | PspRG53ORF2319P | |
| 2332 | tetratricopeptide repeat family | |||
| 3182 | plasmid maintenance system killer protein | |||
| 3183 | R | Psp1811ORFBP (96% identity) | PspRG53ORF3190P | |
| 3184 | 144 aa hypothetical protein | |||
| 3185 | S | S.Psp1811ORFBP (54% identity) | S.PspRG53ORF3190P | |
| 3186 | DNA polymerase beta domain protein region | |||
| 3187 | nucleotidyltransferase | |||
| 3188 | 70 aa hypothetical protein | |||
| 3189 | PilT domain-containing protein | |||
| 3190 | M | M.Mtr4126ORF229P (80% identity) | M.PspRG53ORF3190P | |
| 3191 | 239 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 233 | 347 aa hypothetical protein | |||
| 234 | R | PyaNHR1ORF7075P (93% identity) | PspRG53ORF235P | |
| 235 | M | M.PyaNHR1ORF7075P (93% identity) | M.PspRG53ORF235P | |
| 236 | PBS lyase HEAT domain protein repeat-containing | |||
| 842 | 132 aa hypothetical protein | |||
| 843 | M | M.Psp1811ORFCP (94% identity) | M.PspRG53ORF843P | |
| 844 | amino acid or sugar ABC transporter permease | |||
| 1670 | 541 aa hypothetical protein | |||
| ??? | RM | GliD10ORF1248AP (38% identity) | PspRG53ORF1671P | |
| 1673 | pyridoxamine 5-phosphate oxidase-related, | |||
| 1711 | phosphate uptake transporter (PhoT) ABC | |||
| ??? | M | M.Pmu1806ORFMP (81% identity) | M.PspRG53ORF1712P | |
| 1713 | restriction endonuclease | |||
| 2133 | MotA/TolQ/ExbB proton channel | |||
| 2134 | RM | PagC7805ORF3205P (58% identity) | PspRG53ORF2134P | |
| 2135 | WGR domain-containing protein | |||
| 2199 | 195 aa hypothetical protein | |||
| 2200 | M | M.PyaNHR1ORF23865P (93% identity) | M.PspRG53ORF2200P | |
| 2201 | 67 aa hypothetical protein | |||
| 3024 | HNH endonuclease domain protein | |||
| 3025 | M | M.PyaNHR1ORF2935P (77% identity) | M.PspRG53ORF3025P | |
| 3026 | BLUF domain protein | |||
| 3048 | PilT domain-containing protein | |||
| 3049 | RM | Nsp9414ORF5799P (45% identity) | PspRG53ORF3049CP | |
| 3050 | transposase IS4 family protein | |||
| 3051 | RM | helicase domain protein | PspRG53ORF3049BP | |
| 3052 | periplasmic or secreted lipoprotein | |||
| 3053 | 74 aa hypothetical protein | |||
| 3054 | 100 aa hypothetical protein | |||
| 3055 | RM | Nsp0039ORF3001AP (82% identity) | PspRG53ORF3049AP | |
| 3056 | hydantoinase/oxoprolinase domain family protein | |||
| 3781 | 93 aa hypothetical protein | |||
| 3782 | M | M.Cst3363ORF6100P (76% identity) | M.PspRG53ORF3782P | |
| 3783 | 75 aa hypothetical protein | |||
| 3989 | 466 aa hypothetical protein | |||
| 3990 | RM | Pga1313ORF11800P (14% identity) | PspRG53ORF3990BP | |
| 3991 | transposase, IS4 family | |||
| 3992 | RM | Pga1313ORF11800P (66% identity) | PspRG53ORF3990AP | |
| 3993 | photosystem II D1 protein | |||
| 3993 | photosystem II D1 protein | |||
| 3994 | RM | Nsp0039ORF105P (69% identity) | PspRG53ORF3994P | |
| 3995 | 79 aa hypothetical protein | |||
| plasmid ABRG53a | ||||
| 29 | transposase, mutator type | |||
| 30 | M | M1.Bag18758II (30% identity) | M1.PspRG53ORF30P | |
| 31 | M | M2.SmaKORF1844P (23% identity) | M2.PspRG53ORF30P | |
| 32 | R | KvuY25ORF698P (9% identity) | PspRG53ORF30P | |
| 33 | 247 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3432 | fdxN element excision controlling factor | |||
| 3433 | R | Pga1313McrCP (83% identity) | PspRG53McrCP | |
| 3434 | 77 aa hypothetical protein | |||
| 3435 | 167 aa hypothetical protein | |||
| 3436 | R | 5-methylcytosine-specific restriction enzyme B | PspRG53McrBP | |
| 3438 | class I peptide chain release factor | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 259 | 139 aa hypothetical protein | |||
| 260 | M | M.Psp1811ORFEP (96% identity) | M.PspRG53ORF260P | |
| 261 | 2-phosphosulfolactate phosphatase | |||