Escherichia coli 14EC029 |
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Putative Escherichia coli 14EC029 RM systems
Ref: Li,B. and Wang,X. unpublished
REBASE ref # 21064
| Sequence length: | GenBank #: | |
| Chromosome: | 4,981,062 bp | CP024141 |
| plasmid p14EC029b: | 254,423 bp | CP024143 |
| plasmid p14EC029d: | 106,478 bp | CP024145 |
| plasmid p14EC029e: | 88,553 bp | CP024146 |
REBASE acronym: Eco029
Org_num: 26912
All begin CR538_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21865 | restriction endonuclease | |||
| 21870 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco029ORF21875P |
| 21875 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco029ORF21875P |
| 21880 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco029ORF21875P |
| 21885 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2040 | cell division protein DamX | |||
| 2045 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco029DamP |
| 2050 | ribulose-phosphate 3-epimerase | |||
| 2705 | transporter | |||
| 2710 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco029ORF2710P |
| 2715 | Fis family transcriptional regulator | |||
| 10450 | phosphohydrolase | |||
| 10455 | M | M.SsoSE61DcmP (99% identity) | CCWGG | M.Eco029DcmP |
| 10460 | V | V.SsoSE61DcmP (100% identity) | V.Eco029DcmP | |
| 10465 | EamA family transporter | |||
| 12580 | DUF977 domain-containing protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco029ORF12560P | |
| 12590 | 0 aa hypothetical protein | |||
| 17110 | endonuclease | |||
| 17115 | M | M.Eco883493ORFBP (97% identity) | GATC | M.Eco029ORF17115P |
| 17120 | 75 aa hypothetical protein | |||
| plasmid p14EC029b | ||||
| 26780 | 55 aa hypothetical protein | |||
| 26785 | M | M.YpsF1ORFCP (100% identity) | M.Eco029ORF26785P | |
| 26790 | nuclease | |||
| 27475 | 108 aa hypothetical protein | |||
| 27480 | M | M.YpsF1ORFBP (100% identity) | M.Eco029ORF27480P | |
| 27485 | 202 aa hypothetical protein | |||
| 27605 | DNA-binding protein | |||
| 27610 | M | M.YpsF1ORFDP (100% identity) | M.Eco029ORF27610P | |
| 27615 | 284 aa hypothetical protein | |||
| plasmid p14EC029d | ||||
| 28345 | group II intron reverse transcriptase/maturase | |||
| 28350 | M | M.Ecocq9ORF29050P (100% identity) | M.Eco029ORF28350P | |
| 28355 | 73 aa hypothetical protein | |||
| plasmid p14EC029e | ||||
| 28910 | 0 aa hypothetical protein | |||
| 28915 | M | M.SsoST152ORF25555P (100% identity) | M.Eco029ORF28915P | |
| 28920 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21860 | GTPase | |||
| 21865 | R | Ssp28760MrrP (100% identity) | Eco029MrrP | |
| 21870 | type I restriction-modification system | |||
| 21885 | endoribonuclease SymE | |||
| 21890 | R | Ssp28760McrBP (100% identity) | Eco029McrBP | |
| 21895 | R | Ssp28760McrCP (100% identity) | Eco029McrCP | |