Syntrophothermus lipocalidus DSM 12680 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Syntrophothermus lipocalidus DSM 12680 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14276
Complete sequence: 2,405,559 bp
GenBank #: CP002048 (NC_014220)
REBASE acronym: SliS
Org_num: 6061
All begin Slip_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1124 | Radical SAM domain protein | |||
| 1125 | R | TspJRORF899P (85% identity) | SliSORF1127P | |
| 1126 | restriction modification system DNA specificity | |||
| 1125 | type I site-specific deoxyribonuclease, HsdR | |||
| 1126 | S | S1.MspH1ORFKP (47% identity) | CYTANNNNNNTTC | S.SliSII |
| 1127 | M | M.MspH1ORFKP (92% identity) | CYTANNNNNNTTC | M.SliSII |
| 1128 | Resolvase domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1273 | PglZ domain protein | |||
| 1274 | M | M.Mhu23265ORF6390P (83% identity) | M.SliSORF1274P | |
| 1275 | 1226 aa conserved hypothetical protein | |||
| 1593 | 129 aa hypothetical protein | |||
| 1594 | M | M.Aba57ORF3830P (60% identity) | GATC | M.SliSI |
| 1595 | 4Fe-4S ferredoxin iron-sulfur binding domain | |||
| 1824 | 231 aa hypothetical protein | |||
| 1825 | M | M.EtrGHORF23935P (34% identity) | M.SliSORF1825P | |
| 1826 | 171 aa conserved hypothetical protein | |||
| 1944 | transcriptional regulator, MerR family | |||
| 1945 | M | M.ObaCMORF10580P (54% identity) | ACCTGC | M.SliSORF1945P |
| 1946 | 509 aa hypothetical protein | |||
| 2007 | 61 aa hypothetical protein | |||
| 2008 | M | M.Csp4101ORF27940P (37% identity) | M.SliSORF2008P | |
| 2009 | 105 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1616 | 190 aa hypothetical protein | |||
| 1617 | R | PlaEMrrP (28% identity) | SliSMrrP | |
| 1618 | transcriptional regulator, AbrB family | |||
| 1836 | transcriptional regulator, XRE family | |||
| 1837 | R | restriction endonuclease | SliSMrr2P | |
| 1838 | protein of unknown function UPF0150 | |||